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Related Experiment Videos

RsGDB, the Rhodobacter sphaeroides Genome Database

M Choudhary1, C Mackenzie, N J Mouncey

  • 1Department of Microbiology and Molecular Genetics, University of Texas Medical School, Houston, TX 77030, USA.

Nucleic Acids Research
|December 10, 1998
PubMed
Summary

Researchers sequenced the small chromosome (CII) of Rhodobacter sphaeroides 2.4.1(T) and launched the Rhodobacter sphaeroides Genome Database (RsGDB). This database offers public web access to genomic data for Rhodobacter sphaeroides.

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Area of Science:

  • Microbiology
  • Genomics
  • Bioinformatics

Background:

  • Rhodobacter sphaeroides is a bacterium with a sequenced genome.
  • The small chromosome (CII) of Rhodobacter sphaeroides 2.4.1(T) was targeted for sequencing.

Purpose of the Study:

  • To summarize the sequencing project of the small chromosome (CII) of Rhodobacter sphaeroides.
  • To introduce the first version of the Rhodobacter sphaeroides genome database (RsGDB).

Main Methods:

  • Genome sequencing of the small chromosome (CII).
  • Development of a genome database (RsGDB) to organize and present genomic information.
  • Web-based public access to the database.

Main Results:

  • The sequencing of the small chromosome (CII) of Rhodobacter sphaeroides 2.4.1(T) is complete.

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  • The Rhodobacter sphaeroides Genome Database (RsGDB) has been established.
  • RsGDB provides access to hundreds of low-redundancy sequences and related information.

    • Conclusions:

    • The RsGDB serves as a central resource for Rhodobacter sphaeroides genomic information.
    • Public accessibility via the web facilitates further research and database searching.
    • This initiative enhances the understanding of Rhodobacter sphaeroides genomics.