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Updated: Aug 15, 2026

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Lack of DMBT1 expression in oesophageal, gastric and colon cancers
M Mori1, T Shiraishi, S Tanaka
1Department of Surgery, Medical Institute of Bioregulation, Kyushu University, Beppu, Japan.
Abstract:
Loss of sequences from human chromosome 10q has been reported in several different cancers. Recently, a second candidate tumour-suppressor gene, DMBT1, was identified in this chromosomal region. We studied the mRNA expression and homozygous deletion of this gene in human oesophageal, gastric and colon cancers. Reverse transcriptase polymerase chain reaction (RT-PCR) amplification demonstrated that 23 (53.5%) of 43 oesophageal, 5 (12.5%) of 40 gastric, and 4 (16.7%) of 24 colorectal cancer cases showed an apparent reduction in DMBT1 mRNA in tumour tissues compared with paired normal tissues. Twelve out of 15 oesophageal cancer cell lines also showed no expression. We next studied homozygous deletions within the DMBT1 gene in oesophageal cancers by using duplex PCR. Consequently, it was recognized in five (11.6%) of the primary tumours and two (13.3%) of the cell lines. These findings suggest that DMBT1 may act as a tumour-suppressor gene not only in brain tumours but also in gastrointestinal cancers, especially in oesophageal cancers.
Insights
The deleted in malignant brain tumors 1 (DMBT1) gene shows reduced mRNA expression and homozygous deletions in gastrointestinal cancers, particularly oesophageal cancer. These findings indicate DMBT1 may function as a tumour suppressor in these cancers.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Loss of sequences on human chromosome 10q is implicated in various cancers.
- DMBT1 (deleted in malignant brain tumors 1) is a candidate tumour-suppressor gene located in this critical chromosomal region.
Purpose of the Study:
- To investigate the mRNA expression and homozygous deletion of the DMBT1 gene in human oesophageal, gastric, and colon cancers.
- To assess the potential role of DMBT1 as a tumour suppressor in gastrointestinal malignancies.
Main Methods:
- Reverse transcriptase polymerase chain reaction (RT-PCR) was used to analyze DMBT1 mRNA expression.
- Duplex PCR was employed to detect homozygous deletions within the DMBT1 gene in primary tumours and cancer cell lines.
Main Results:
- Reduced DMBT1 mRNA expression was observed in 53.5% of oesophageal, 12.5% of gastric, and 16.7% of colorectal cancers compared to normal tissues.
- No DMBT1 expression was detected in 12 out of 15 oesophageal cancer cell lines.
- Homozygous deletions of DMBT1 were identified in 11.6% of oesophageal primary tumours and 13.3% of oesophageal cancer cell lines.
Conclusions:
- The study suggests that DMBT1 functions as a tumour suppressor gene in gastrointestinal cancers.
- DMBT1 plays a significant role, particularly in the development of oesophageal cancers.
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