A peptide corresponding to residues Asp177 to Asn208 of human cyclin A forms an alpha-helix

Cyclins are essential activators of eukaryotic cell cycle-regulating enzymes called cyclin-dependent kinases (CDKs). The binding of cyclins to CDKs is mediated by a structural motif comprising a five-helix bundle called the cyclin fold and an additional helix (the N-terminal alpha-helix) located N-terminal to the cyclin fold. In this work, we examine, using CD and NMR spectroscopy, the structure of a 32-residue synthetic peptide derived from the segment (Asp177 to Asn208) corresponding to the N-terminal alpha-helix of human cyclin A. CD spectroscopic analysis of the peptide revealed that trifluoroethanol (TFE) can induce the peptide to assume a stable alpha-helix conformation. Two-dimensional 1H NMR spectroscopy showed that the alpha-helix is formed by the Asp181 to Cys193 segment of the peptide. The alpha-helical structure of the peptide in the TFE/H2O cosolvent was found to be identical to that in the crystal structure of intact cyclin A. Taken together, these results suggest that the N-terminal alpha-helix of cyclins may exist as an independent structural unit that plays essential functional roles in activating CDKs.