Telomerase protein rather than its RNA is the target of phosphorothioate-modified oligonucleotides
1Max-Delbrück-Centrum für Molekulare Medizin, Robert-R ossle-Strasse 10, D-13092 Berlin, Germany. emat@mdc-berlin.de
Abstract:
Human telomerase is a ribonucleoprotein which uses its internal RNA moiety as a template for telomeric DNA synthesis. This enzyme is up-regulated in most malignant tumors and is therefore considered as a possible cancer target. Here we examined the effects of differently modified oligomers on telomeraseactivity from HL-60 cell extracts (TRAP-ezetrade mark assay). Phosphorothioate-modified oligonucleotides (PS-ODNs) inhibited telomerase activity at subnanomolar concen-trations and proved to be more efficient than peptide nucleic acids. In contrast to all the investigated oligomers, PS-ODNs were found to bind to the protein motif of telomerase called the primer binding site but poorly to its RNA. This is suggested by kinetic investigations demonstrating a competitive interaction of PS-ODNs and TS primer at the primer binding site. The K m value of the TS primer was 10.8 nM, the K i value of a 20mer PS-ODN was 1.6 nM. When the TS primer was PS-modified a striking increase in the telomerase activity was found which correlates with the number of phosphodiesters replaced. The K m value of a completely PS-modified TS primer was 0.56 nM. Based on these results the design of chimeric ODNs is proposed consisting of a 5'-PS-modified part targeting the primer binding site and a 3'-terminus part targeting the telomerase RNA.
Insights
Phosphorothioate-modified oligonucleotides (PS-ODNs) effectively inhibit human telomerase, a key cancer target, by binding to its primer site. Modified primers surprisingly increased enzyme activity, suggesting novel therapeutic design strategies.
Area of Science:
- Molecular Biology
- Biochemistry
- Cancer Research
Background:
- Human telomerase is a ribonucleoprotein essential for telomere maintenance.
- Telomerase is upregulated in most cancers, making it a promising therapeutic target.
- Oligonucleotides are investigated for their potential to modulate telomerase activity.
Purpose of the Study:
- To evaluate the efficacy of modified oligonucleotides in inhibiting human telomerase activity.
- To elucidate the binding interactions of these oligonucleotides with telomerase.
- To explore novel oligonucleotide designs for cancer therapy.
Main Methods:
- Telomerase activity was assessed using the TRAP-ez assay on HL-60 cell extracts.
- Kinetic studies were performed to determine binding interactions and inhibition constants.
- Various modified oligonucleotides, including phosphorothioate-modified oligonucleotides (PS-ODNs) and peptide nucleic acids, were tested.
Main Results:
- PS-ODNs demonstrated potent inhibition of telomerase activity at subnanomolar concentrations, outperforming peptide nucleic acids.
- PS-ODNs preferentially bind to the primer binding site of telomerase, exhibiting competitive inhibition with the TS primer.
- PS-modification of the TS primer itself led to a significant increase in telomerase activity, dependent on the degree of modification.
Conclusions:
- PS-ODNs are highly effective inhibitors of human telomerase, targeting its primer binding site.
- The unexpected enhancement of telomerase activity by PS-modified TS primers suggests complex regulatory mechanisms.
- Chimeric oligonucleotides, combining PS-modified elements for primer site targeting and RNA-targeting sequences, are proposed for optimized therapeutic design.
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