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Updated: Aug 12, 2026

Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions
Published on: June 28, 2018
Core promoter elements can regulate transcription on a separate chromosome in trans
J R Morris1, P K Geyer, C T Wu
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115 USA.
Transvection, where gene expression depends on nearby genes, can be regulated by core promoter elements. The TATA box and initiator element were found to control enhancer action in trans.
Area of Science:
- Molecular Genetics
- Developmental Biology
- Drosophila melanogaster research
Background:
- Transvection describes how gene expression can be influenced by the proximity of homologous sequences.
- This phenomenon explains intragenic complementation, particularly in the Drosophila yellow gene.
- A key mechanism involves enhancers acting in trans on a promoter located on a separate chromosome.
Purpose of the Study:
- To identify cis-acting elements that govern the trans action of enhancers.
- To investigate the role of core promoter elements in regulating transvection at the Drosophila yellow gene.
Main Methods:
- Utilized gene replacement techniques to modify specific core promoter elements within the yellow gene.
- Generated and analyzed mutant yellow alleles to assess their capacity to support transvection.
- Examined the impact of alterations to the TATA box and initiator element on enhancer-promoter interactions.
Main Results:
- Demonstrated that the TATA box is a critical cis-acting element involved in regulating transvection.
- Showed that the initiator element also plays a significant role in controlling transvection.
- These core promoter elements modulate the ability of enhancers to act in trans.
Conclusions:
- The TATA box and initiator element are key regulators of transvection at the Drosophila yellow locus.
- These findings provide insights into the mechanisms underlying enhancer-promoter communication across homologous chromosomes.
- Understanding these cis-acting elements is crucial for deciphering gene regulation involving trans-acting factors and homologous interactions.
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