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Systematic Biology|July 13, 2021
Evolutionary Rate Variation among Lineages in Gene Trees has a Negative Impact on Species-Tree InferenceMezzalina Vankan, Simon Y W Ho, David A Duchêne
Bioinformatics (Oxford, England)|February 27, 2018
PhyloMAd: efficient assessment of phylogenomic model adequacyDavid A Duchêne, Sebastian Duchêne, Simon Y W Ho
Molecular Biology and Evolution|July 12, 2015
Evaluating the Adequacy of Molecular Clock Models Using Posterior Predictive SimulationsDavid A Duchêne, Sebastian Duchêne, Edward C Holmes, et al.
Bulletin of Mathematical Biology|January 23, 2025
Bayesian Inference of Phylogenetic Distances: Revisiting the Eigenvalue ApproachMatthew J Penn, Neil Scheidwasser, Christl A Donnelly, et al.
Systematic Biology|September 11, 2021
Excluding Loci With Substitution Saturation Improves Inferences From Phylogenomic DataDavid A Duchêne, Niklas Mather, Cara Van Der Wal, et al.
Proceedings. Biological Sciences|March 21, 2019
Sexual selection, body mass and molecular evolution interact to predict diversification in birdsMaider Iglesias-Carrasco, Michael D Jennions, Simon Y W Ho, et al.
Genome Biology and Evolution|March 25, 2024
ClockstaRX: Testing Molecular Clock Hypotheses With Genomic DataDavid A Duchêne, Sebastián Duchêne, Josefin Stiller, et al.
Systematic Biology|December 28, 2023
The Limits of the Constant-rate Birth-Death Prior for Phylogenetic Tree Topology InferenceMark P Khurana, Neil Scheidwasser-Clow, Matthew J Penn, et al.
Systematic Biology|May 28, 2019
A Simulation-Based Evaluation of Tip-Dating Under the Fossilized Birth-Death ProcessArong Luo, David A Duchêne, Chi Zhang, et al.
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