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Journal of Chemical Information and Modeling|September 25, 2025
Minimum Energy Pathway for Lesion Recognition and DNA Binding by RAD4/XPCAadarsh Raghunathan, Marimuthu KrishnanNucleic Acids Research|June 17, 2024
ASH1L guards cis-regulatory elements against cyclobutane pyrimidine dimer inductionMichelle N Yancoskie, Reihaneh Khaleghi, Anirvinya Gururajan, et al.Journal of Chemical Information and Modeling|July 7, 2023
Molecular Dynamics and Machine Learning Study of Adrenaline Dynamics in the Binding Pocket of GPCRKeshavan Seshadri, Marimuthu KrishnanJournal of Chemical Information and Modeling|February 24, 2018
Molecular Mechanism, Dynamics, and Energetics of Protein-Mediated Dinucleotide Flipping in a Mismatched DNA: A Computational Study of the RAD4-DNA ComplexKartheek Pitta, Marimuthu KrishnanThe Journal of Chemical Physics|November 15, 2022
Enhanced sampling using replica exchange with nonequilibrium switches: A case study on simple modelsShaunak Badani, Marimuthu KrishnanThe Journal of Physical Chemistry. B|April 29, 2017
Direct Determination of Site-Specific Noncovalent Interaction Strengths of Proteins from NMR-Derived Fast Side Chain Motional ParametersRajitha Rajeshwar T, Marimuthu KrishnanThe Journal of Physical Chemistry. B|March 10, 2012
Reconstruction of protein side-chain conformational free energy surfaces from NMR-derived methyl axis order parametersMarimuthu Krishnan, Jeremy C SmithJournal of the American Chemical Society|July 23, 2009
Response of small-scale, methyl rotors to protein-ligand association: a simulation analysis of calmodulin-peptide bindingMarimuthu Krishnan, Jeremy C SmithJournal of Chemical Information and Modeling|March 21, 2022
Response of Terahertz Protein Vibrations to Ligand Binding: Calmodulin-Peptide Complexes as a Case StudyBhagyesh Varvdekar, Akshay Prabhakant, Marimuthu KrishnanJournal of Chemical Information and Modeling|October 27, 2020
Allosteric Response of DNA Recognition Helices of Catabolite Activator Protein to cAMP and DNA BindingAkshay Prabhakant, Abhinandan Panigrahi, Marimuthu KrishnanPageof 2