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Plos Genetics|December 6, 2008
Practical issues in imputation-based association mappingYongtao Guan, Matthew StephensPlos Genetics|October 8, 2013
Integrated enrichment analysis of variants and pathways in genome-wide association studies indicates central role for IL-2 signaling genes in type 1 diabetes, and cytokine signaling genes in Crohn's diseasePeter Carbonetto, Matthew StephensNature Methods|February 18, 2014
Efficient multivariate linear mixed model algorithms for genome-wide association studiesXiang Zhou, Matthew StephensStatistica Sinica|December 27, 2023
UNIFYING AND GENERALIZING METHODS FOR REMOVING UNWANTED VARIATION BASED ON NEGATIVE CONTROLSDavid Gerard, Matthew StephensJournal of Machine Learning Research : JMLR|November 3, 2023
Empirical Bayes Matrix FactorizationWei Wang, Matthew StephensGenetics|January 6, 2004
Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism dataNa Li, Matthew StephensCell and Tissue Research|February 10, 2018
Neutrophil-lymphatic interactions during acute and chronic diseaseMatthew Stephens, Shan LiaoAmerican Journal of Human Genetics|February 9, 2005
Accounting for decay of linkage disequilibrium in haplotype inference and missing-data imputationMatthew Stephens, Paul ScheetBiostatistics (Oxford, England)|July 10, 2018
Empirical Bayes shrinkage and false discovery rate estimation, allowing for unwanted variationDavid Gerard, Matthew StephensThe Annals of Applied Statistics|September 29, 2015
BAYESIAN METHODS FOR GENETIC ASSOCIATION ANALYSIS WITH HETEROGENEOUS SUBGROUPS: FROM META-ANALYSES TO GENE-ENVIRONMENT INTERACTIONSXiaoquan Wen, Matthew StephensPageof 21