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BMC Research Notes
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July 15, 2016
GP0.4 from bacteriophage T7: in silico characterisation of its structure and interaction with E. coli FtsZ
Adam J Simpkin, Daniel J Rigden
Bioinformatics Advances
|
July 25, 2025
ABCFold: easier running and comparison of AlphaFold 3, Boltz-1, and Chai-1
Luc G Elliott, Adam J Simpkin, Daniel J Rigden
Acta Crystallographica. Section D, Structural Biology
|
October 3, 2024
The success rate of processed predicted models in molecular replacement: implications for experimental phasing in the AlphaFold era
Ronan M Keegan, Adam J Simpkin, Daniel J Rigden
Bioscience Reports
|
July 11, 2023
Structural insights into pink-eyed dilution protein (Oca2)
Shahram Mesdaghi, David L Murphy, Adam J Simpkin, et al.
Acta Crystallographica. Section D, Structural Biology
|
November 2, 2021
Redeployment of automated MrBUMP search-model identification for map fitting in cryo-EM
Adam J Simpkin, Martyn D Winn, Daniel J Rigden, et al.
Proteins
|
July 21, 2021
Evaluation of model refinement in CASP14
Adam J Simpkin, Filomeno Sánchez Rodríguez, Shahram Mesdaghi, et al.
Acta Crystallographica. Section D, Structural Biology
|
May 3, 2022
MrParse: finding homologues in the PDB and the EBI AlphaFold database for molecular replacement and more
Adam J Simpkin, Jens M H Thomas, Ronan M Keegan, et al.
Journal of Chemical Information and Modeling
|
March 23, 2026
Physical Implausibility of Carbohydrate Ligands in Results of Deep Learning-Based Cofolding Methods
Muhammad Luthfi, Adam J Simpkin, Luc G Elliott, et al.
Iucrj
|
October 10, 2024
Using deep-learning predictions reveals a large number of register errors in PDB depositions
Filomeno Sánchez Rodríguez, Adam J Simpkin, Grzegorz Chojnowski, et al.
Acta Crystallographica. Section D, Structural Biology
|
December 4, 2019
Molecular replacement using structure predictions from databases
Adam J Simpkin, Jens M H Thomas, Felix Simkovic, et al.
Page
of 3
Search research articles
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Showing results (1-10 of 28) with videos related to
Sort By:
Page
of 3
BMC Research Notes
|
July 15, 2016
GP0.4 from bacteriophage T7: in silico characterisation of its structure and interaction with E. coli FtsZ
Adam J Simpkin, Daniel J Rigden
Bioinformatics Advances
|
July 25, 2025
ABCFold: easier running and comparison of AlphaFold 3, Boltz-1, and Chai-1
Luc G Elliott, Adam J Simpkin, Daniel J Rigden
Acta Crystallographica. Section D, Structural Biology
|
October 3, 2024
The success rate of processed predicted models in molecular replacement: implications for experimental phasing in the AlphaFold era
Ronan M Keegan, Adam J Simpkin, Daniel J Rigden
Bioscience Reports
|
July 11, 2023
Structural insights into pink-eyed dilution protein (Oca2)
Shahram Mesdaghi, David L Murphy, Adam J Simpkin, et al.
Acta Crystallographica. Section D, Structural Biology
|
November 2, 2021
Redeployment of automated MrBUMP search-model identification for map fitting in cryo-EM
Adam J Simpkin, Martyn D Winn, Daniel J Rigden, et al.
Proteins
|
July 21, 2021
Evaluation of model refinement in CASP14
Adam J Simpkin, Filomeno Sánchez Rodríguez, Shahram Mesdaghi, et al.
Acta Crystallographica. Section D, Structural Biology
|
May 3, 2022
MrParse: finding homologues in the PDB and the EBI AlphaFold database for molecular replacement and more
Adam J Simpkin, Jens M H Thomas, Ronan M Keegan, et al.
Journal of Chemical Information and Modeling
|
March 23, 2026
Physical Implausibility of Carbohydrate Ligands in Results of Deep Learning-Based Cofolding Methods
Muhammad Luthfi, Adam J Simpkin, Luc G Elliott, et al.
Iucrj
|
October 10, 2024
Using deep-learning predictions reveals a large number of register errors in PDB depositions
Filomeno Sánchez Rodríguez, Adam J Simpkin, Grzegorz Chojnowski, et al.
Acta Crystallographica. Section D, Structural Biology
|
December 4, 2019
Molecular replacement using structure predictions from databases
Adam J Simpkin, Jens M H Thomas, Felix Simkovic, et al.
Page
of 3