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Journal of Chemical Theory and Computation
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August 16, 2023
Extension of the SUGRES-1P Coarse-Grained Model of Polysaccharides to Heparin
Annemarie Danielsson, Sergey A Samsonov, Adam Liwo, et al.
Genes
|
December 6, 2018
Reoptimized UNRES Potential for Protein Model Quality Assessment
Eshel Faraggi, Pawel Krupa, Magdalena A Mozolewska, et al.
The Journal of Chemical Physics
|
December 6, 2006
Implementation of a symplectic multiple-time-step molecular dynamics algorithm, based on the united-residue mesoscopic potential energy function
Franciszek Rakowski, Paweł Grochowski, Bogdan Lesyng, et al.
Proteins
|
December 18, 2008
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. I. Importance of hydrophobic interactions in stabilization of beta-hairpin structure
Agnieszka Skwierawska, Joanna Makowska, Stanisław Ołdziej, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
February 15, 2022
Probing Protein Aggregation Using the Coarse-Grained UNRES Force Field
Ana V Rojas, Gia G Maisuradze, Harold A Scheraga, et al.
The Journal of Physical Chemistry. B
|
July 21, 2006
Molecular dynamics with the united-residue model of polypeptide chains. I. Lagrange equations of motion and tests of numerical stability in the microcanonical mode
Mey Khalili, Adam Liwo, Franciszek Rakowski, et al.
The Journal of Physical Chemistry. B
|
March 29, 2007
Simple physics-based analytical formulas for the potentials of mean force for the interaction of amino acid side chains in water. 2. Tests with simple spherical systems
Mariusz Makowski, Adam Liwo, Katarzyna Maksimiak, et al.
Proteins
|
February 26, 2009
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. II. Interplay of local backbone conformational dynamics and long-range hydrophobic interactions in hairpin formation
Agnieszka Skwierawska, Wioletta Zmudzińska, Stanisław Ołdziej, et al.
Biopolymers
|
July 12, 2008
Acidic-basic properties of three alanine-based peptides containing acidic and basic side chains: comparison between theory and experiment
Joanna Makowska, Katarzyna Bagińska, Adam Liwo, et al.
Physical Review Letters
|
March 19, 2013
Mean-field interactions between nucleic-acid-base dipoles can drive the formation of a double helix
Yi He, Maciej Maciejczyk, Stanisław Ołdziej, et al.
Page
of 19
Search research articles
Search
Showing results (81-90 of 185) with videos related to
Sort By:
Page
of 19
Journal of Chemical Theory and Computation
|
August 16, 2023
Extension of the SUGRES-1P Coarse-Grained Model of Polysaccharides to Heparin
Annemarie Danielsson, Sergey A Samsonov, Adam Liwo, et al.
Genes
|
December 6, 2018
Reoptimized UNRES Potential for Protein Model Quality Assessment
Eshel Faraggi, Pawel Krupa, Magdalena A Mozolewska, et al.
The Journal of Chemical Physics
|
December 6, 2006
Implementation of a symplectic multiple-time-step molecular dynamics algorithm, based on the united-residue mesoscopic potential energy function
Franciszek Rakowski, Paweł Grochowski, Bogdan Lesyng, et al.
Proteins
|
December 18, 2008
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. I. Importance of hydrophobic interactions in stabilization of beta-hairpin structure
Agnieszka Skwierawska, Joanna Makowska, Stanisław Ołdziej, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
February 15, 2022
Probing Protein Aggregation Using the Coarse-Grained UNRES Force Field
Ana V Rojas, Gia G Maisuradze, Harold A Scheraga, et al.
The Journal of Physical Chemistry. B
|
July 21, 2006
Molecular dynamics with the united-residue model of polypeptide chains. I. Lagrange equations of motion and tests of numerical stability in the microcanonical mode
Mey Khalili, Adam Liwo, Franciszek Rakowski, et al.
The Journal of Physical Chemistry. B
|
March 29, 2007
Simple physics-based analytical formulas for the potentials of mean force for the interaction of amino acid side chains in water. 2. Tests with simple spherical systems
Mariusz Makowski, Adam Liwo, Katarzyna Maksimiak, et al.
Proteins
|
February 26, 2009
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. II. Interplay of local backbone conformational dynamics and long-range hydrophobic interactions in hairpin formation
Agnieszka Skwierawska, Wioletta Zmudzińska, Stanisław Ołdziej, et al.
Biopolymers
|
July 12, 2008
Acidic-basic properties of three alanine-based peptides containing acidic and basic side chains: comparison between theory and experiment
Joanna Makowska, Katarzyna Bagińska, Adam Liwo, et al.
Physical Review Letters
|
March 19, 2013
Mean-field interactions between nucleic-acid-base dipoles can drive the formation of a double helix
Yi He, Maciej Maciejczyk, Stanisław Ołdziej, et al.
Page
of 19