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Agnieszka G Lipska

Showing results (1-10 of 22) with videos related to

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Journal of Molecular Graphics & Modelling|November 22, 2017
Shielding effect in protein foldingAdam K Sieradzan, Agnieszka G Lipska, Emilia A Lubecka
Glycobiology|March 8, 2021
Further analyses of APRIL/APRIL-receptor/glycosaminoglycan interactions by biochemical assays linked to computational studiesMateusz Marcisz, Bertrand Huard, Agnieszka G Lipska, et al.
The Journal of Physical Chemistry Letters|October 27, 2023
Toward Consistent Physics-Based Modeling of Local Backbone Structures and Chirality Change of Proteins in Coarse-Grained ApproachesAgnieszka G Lipska, Adam K Sieradzan, Sümeyye Atmaca, et al.
Methods in Molecular Biology (Clifton, N.J.)|November 14, 2024
Mean-Field Coupling Between Local Interactions in Proteins in Relation to Chirality, Secondary, and Supersecondary Structure Formation, and AllosteryAdam Liwo, Celina Sikorska, Agnieszka G Lipska, et al.
Methods in Molecular Biology (Clifton, N.J.)|November 22, 2024
Secondary Structure in Free and Assisted Modeling of Proteins with the Coarse-Grained UNRES Force FieldEmilia A Lubecka, Cezary Czaplewski, Adam K Sieradzan, et al.
Journal of Molecular Modeling|March 4, 2015
Studies of conformational changes of an arginine-binding protein from Thermotoga maritima in the presence and absence of ligand via molecular dynamics simulations with the coarse-grained UNRES force fieldAgnieszka G Lipska, Adam K Sieradzan, Paweł Krupa, et al.
Biomolecules|September 28, 2021
Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important SystemsAdam Liwo, Cezary Czaplewski, Adam K Sieradzan, et al.
The Journal of Chemical Physics|May 16, 2016
Molecular dynamics of protein A and a WW domain with a united-residue model including hydrodynamic interactionAgnieszka G Lipska, Steven R Seidman, Adam K Sieradzan, et al.
Journal of Molecular Modeling|June 24, 2022
Coarse-grained modeling of the calcium, sodium, magnesium and potassium cations interacting with proteinsAgnieszka G Lipska, Anna M Antoniak, Patryk Wesołowski, et al.
The Journal of Chemical Physics|April 22, 2019
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. III. Determination of scale-consistent backbone-local and correlation potentials in the UNRES force field and force-field calibration and validationAdam Liwo, Adam K Sieradzan, Agnieszka G Lipska, et al.
Pageof 3

Showing results (1-10 of 22) with videos related to

Sort By:
Pageof 3
Journal of Molecular Graphics & Modelling|November 22, 2017
Shielding effect in protein foldingAdam K Sieradzan, Agnieszka G Lipska, Emilia A Lubecka
Glycobiology|March 8, 2021
Further analyses of APRIL/APRIL-receptor/glycosaminoglycan interactions by biochemical assays linked to computational studiesMateusz Marcisz, Bertrand Huard, Agnieszka G Lipska, et al.
The Journal of Physical Chemistry Letters|October 27, 2023
Toward Consistent Physics-Based Modeling of Local Backbone Structures and Chirality Change of Proteins in Coarse-Grained ApproachesAgnieszka G Lipska, Adam K Sieradzan, Sümeyye Atmaca, et al.
Methods in Molecular Biology (Clifton, N.J.)|November 14, 2024
Mean-Field Coupling Between Local Interactions in Proteins in Relation to Chirality, Secondary, and Supersecondary Structure Formation, and AllosteryAdam Liwo, Celina Sikorska, Agnieszka G Lipska, et al.
Methods in Molecular Biology (Clifton, N.J.)|November 22, 2024
Secondary Structure in Free and Assisted Modeling of Proteins with the Coarse-Grained UNRES Force FieldEmilia A Lubecka, Cezary Czaplewski, Adam K Sieradzan, et al.
Journal of Molecular Modeling|March 4, 2015
Studies of conformational changes of an arginine-binding protein from Thermotoga maritima in the presence and absence of ligand via molecular dynamics simulations with the coarse-grained UNRES force fieldAgnieszka G Lipska, Adam K Sieradzan, Paweł Krupa, et al.
Biomolecules|September 28, 2021
Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important SystemsAdam Liwo, Cezary Czaplewski, Adam K Sieradzan, et al.
The Journal of Chemical Physics|May 16, 2016
Molecular dynamics of protein A and a WW domain with a united-residue model including hydrodynamic interactionAgnieszka G Lipska, Steven R Seidman, Adam K Sieradzan, et al.
Journal of Molecular Modeling|June 24, 2022
Coarse-grained modeling of the calcium, sodium, magnesium and potassium cations interacting with proteinsAgnieszka G Lipska, Anna M Antoniak, Patryk Wesołowski, et al.
The Journal of Chemical Physics|April 22, 2019
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. III. Determination of scale-consistent backbone-local and correlation potentials in the UNRES force field and force-field calibration and validationAdam Liwo, Adam K Sieradzan, Agnieszka G Lipska, et al.
Pageof 3