Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Filters

Ai Shinobu

Showing results (1-10 of 13) with videos related to

Pageof 2
Sort By:
Journal of Chemical Theory and Computation|January 11, 2017
Proton Wire Dynamics in the Green Fluorescent ProteinAi Shinobu, Noam Agmon
The Journal of Physical Chemistry. B|January 31, 2015
The hole in the barrel: water exchange at the GFP chromophoreAi Shinobu, Noam Agmon
The Journal of Physical Chemistry. A|April 25, 2009
Mapping proton wires in proteins: carbonic anhydrase and GFP chromophore biosynthesisAi Shinobu, Noam Agmon
Frontiers in Molecular Biosciences|May 16, 2022
Practical Protocols for Efficient Sampling of Kinase-Inhibitor Binding Pathways Using Two-Dimensional Replica-Exchange Molecular DynamicsAi Shinobu, Suyong Re, Yuji Sugita
Current Opinion in Cell Biology|December 11, 2025
Network structures and parameters in multiscale modeling in ErbB signaling networksAi Shinobu, Ayaka Nagasato-Ichikawa, Mariko Okada
Biophysics and Physicobiology|January 28, 2020
Building a macro-mixing dual-basin Gō model using the Multistate Bennett Acceptance RatioAi Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
The Journal of Chemical Physics|November 24, 2018
Refining evERdock: Improved selection of good protein-protein complex models achieved by MD optimization and use of multiple conformationsAi Shinobu, Kazuhiro Takemura, Nobuyuki Matubayasi, et al.
Journal of Chemical Information and Modeling|May 6, 2021
Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain ProteinsAi Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
Journal of the American Chemical Society|August 12, 2010
Visualizing proton antenna in a high-resolution green fluorescent protein structureAi Shinobu, Gottfried J Palm, Abraham J Schierbeek, et al.
The Journal of Chemical Physics|December 12, 2019
evERdock BAI: Machine-learning-guided selection of protein-protein complex structureKei Terayama, Ai Shinobu, Koji Tsuda, et al.
Pageof 2

Showing results (1-10 of 13) with videos related to

Sort By:
Pageof 2
Journal of Chemical Theory and Computation|January 11, 2017
Proton Wire Dynamics in the Green Fluorescent ProteinAi Shinobu, Noam Agmon
The Journal of Physical Chemistry. B|January 31, 2015
The hole in the barrel: water exchange at the GFP chromophoreAi Shinobu, Noam Agmon
The Journal of Physical Chemistry. A|April 25, 2009
Mapping proton wires in proteins: carbonic anhydrase and GFP chromophore biosynthesisAi Shinobu, Noam Agmon
Frontiers in Molecular Biosciences|May 16, 2022
Practical Protocols for Efficient Sampling of Kinase-Inhibitor Binding Pathways Using Two-Dimensional Replica-Exchange Molecular DynamicsAi Shinobu, Suyong Re, Yuji Sugita
Current Opinion in Cell Biology|December 11, 2025
Network structures and parameters in multiscale modeling in ErbB signaling networksAi Shinobu, Ayaka Nagasato-Ichikawa, Mariko Okada
Biophysics and Physicobiology|January 28, 2020
Building a macro-mixing dual-basin Gō model using the Multistate Bennett Acceptance RatioAi Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
The Journal of Chemical Physics|November 24, 2018
Refining evERdock: Improved selection of good protein-protein complex models achieved by MD optimization and use of multiple conformationsAi Shinobu, Kazuhiro Takemura, Nobuyuki Matubayasi, et al.
Journal of Chemical Information and Modeling|May 6, 2021
Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain ProteinsAi Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
Journal of the American Chemical Society|August 12, 2010
Visualizing proton antenna in a high-resolution green fluorescent protein structureAi Shinobu, Gottfried J Palm, Abraham J Schierbeek, et al.
The Journal of Chemical Physics|December 12, 2019
evERdock BAI: Machine-learning-guided selection of protein-protein complex structureKei Terayama, Ai Shinobu, Koji Tsuda, et al.
Pageof 2