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Current Opinion in Structural Biology|November 10, 2024
Conformational penalties: New insights into nucleic acid recognitionAinan Geng, Rohit Roy, Hashim M Al-HashimiNucleic Acids Research|December 19, 2025
Revealing hidden protonated conformational states in RNA dynamic ensemblesAinan Geng, Rohit Roy, Laura Ganser, et al.Nature Communications|December 19, 2023
An RNA excited conformational state at atomic resolutionAinan Geng, Laura Ganser, Rohit Roy, et al.Journal of the American Chemical Society|October 13, 2023
Kinetic Resolution of the Atomic 3D Structures Formed by Ground and Excited Conformational States in an RNA Dynamic EnsembleRohit Roy, Ainan Geng, Honglue Shi, et al.Journal of Magnetic Resonance (San Diego, Calif. : 1997)|June 4, 2025
Probing rare and short-lived conformational states in nucleic acids using off-resonance carbonyl and guanidino carbon R<sub>1ρ</sub> relaxation dispersionSupriya Pratihar, Yeongjoon Lee, Ainan Geng, et al.Journal of Molecular Biology|May 9, 2025
Insight into the Conformational Ensembles Formed by U-U and T-T Mismatches in RNA and DNA Duplexes From a Structure-based Survey, NMR, and Molecular Dynamics SimulationsAinan Geng, Rohit Roy, Stephanie Gu, et al.Nature|May 17, 2023
RNA conformational propensities determine cellular activityMegan L Ken, Rohit Roy, Ainan Geng, et al.Biorxiv : the Preprint Server for Biology|January 7, 2025
An A-T Hoogsteen base pair in a naked DNA hairpin motif: A Protein-Recognized ConformationSerafima Guseva, Or Szekely, Ainan Geng, et al.Cell|March 19, 2026
Thermodynamic prediction of RNA cellular activity from sequence via conformational ensemblesAinan Geng, Rohit Roy, Megan Ken, et al.Proceedings of the National Academy of Sciences of the United States of America|June 12, 2023
Turing, von Neumann, and the computational architecture of biological machinesHashim M Al-HashimiPageof 17