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Nature Communications
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December 22, 2022
A balanced measure shows superior performance of pseudobulk methods in single-cell RNA-sequencing analysis
Alan E Murphy, Nathan G Skene
Elife
|
December 4, 2023
Avoiding false discoveries in single-cell RNA-seq by revisiting the first Alzheimer's disease dataset
Alan E Murphy, Nurun Fancy, Nathan Skene
Cell Research
|
April 8, 2026
Predicting non-coding variant effects with AlphaGenome
Alan E Murphy, Masayuki Nagai, Peter K Koo
Nature Communications
|
January 3, 2024
rworkflows: automating reproducible practices for the R community
Brian M Schilder, Alan E Murphy, Nathan G Skene
Bioinformatics (Oxford, England)
|
October 3, 2021
MungeSumstats: a Bioconductor package for the standardization and quality control of many GWAS summary statistics
Alan E Murphy, Brian M Schilder, Nathan G Skene
Journal of Inherited Metabolic Disease
|
December 11, 2022
Transcriptomic analyses reveal neuronal specificity of Leigh syndrome associated genes
Azizia Wahedi, Chandika Soondram, Alan E Murphy, et al.
Nature Communications
|
November 16, 2024
Predicting cell type-specific epigenomic profiles accounting for distal genetic effects
Alan E Murphy, William Beardall, Marek Rei, et al.
Nucleic Acids Research
|
December 11, 2024
Predicting gene expression from histone marks using chromatin deep learning models depends on histone mark function, regulatory distance and cellular states
Alan E Murphy, Aydan Askarova, Boris Lenhard, et al.
Bioinformatics Advances
|
May 30, 2023
EpiCompare: R package for the comparison and quality control of epigenomic peak files
Sera Choi, Brian M Schilder, Leyla Abbasova, et al.
Molecular & Cellular Proteomics : MCP
|
January 3, 2022
Multidimensional Dynamics of the Proteome in the Neurodegenerative and Aging Mammalian Brain
Byron Andrews, Alan E Murphy, Michele Stofella, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 13) with videos related to
Sort By:
Page
of 2
Nature Communications
|
December 22, 2022
A balanced measure shows superior performance of pseudobulk methods in single-cell RNA-sequencing analysis
Alan E Murphy, Nathan G Skene
Elife
|
December 4, 2023
Avoiding false discoveries in single-cell RNA-seq by revisiting the first Alzheimer's disease dataset
Alan E Murphy, Nurun Fancy, Nathan Skene
Cell Research
|
April 8, 2026
Predicting non-coding variant effects with AlphaGenome
Alan E Murphy, Masayuki Nagai, Peter K Koo
Nature Communications
|
January 3, 2024
rworkflows: automating reproducible practices for the R community
Brian M Schilder, Alan E Murphy, Nathan G Skene
Bioinformatics (Oxford, England)
|
October 3, 2021
MungeSumstats: a Bioconductor package for the standardization and quality control of many GWAS summary statistics
Alan E Murphy, Brian M Schilder, Nathan G Skene
Journal of Inherited Metabolic Disease
|
December 11, 2022
Transcriptomic analyses reveal neuronal specificity of Leigh syndrome associated genes
Azizia Wahedi, Chandika Soondram, Alan E Murphy, et al.
Nature Communications
|
November 16, 2024
Predicting cell type-specific epigenomic profiles accounting for distal genetic effects
Alan E Murphy, William Beardall, Marek Rei, et al.
Nucleic Acids Research
|
December 11, 2024
Predicting gene expression from histone marks using chromatin deep learning models depends on histone mark function, regulatory distance and cellular states
Alan E Murphy, Aydan Askarova, Boris Lenhard, et al.
Bioinformatics Advances
|
May 30, 2023
EpiCompare: R package for the comparison and quality control of epigenomic peak files
Sera Choi, Brian M Schilder, Leyla Abbasova, et al.
Molecular & Cellular Proteomics : MCP
|
January 3, 2022
Multidimensional Dynamics of the Proteome in the Neurodegenerative and Aging Mammalian Brain
Byron Andrews, Alan E Murphy, Michele Stofella, et al.
Page
of 2