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BMC Bioinformatics|April 25, 2007
An adaptive bin framework search method for a beta-sheet protein homopolymer modelAlena Shmygelska, Holger H HoosBMC Bioinformatics|February 16, 2005
An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problemAlena Shmygelska, Holger H HoosBMC Bioinformatics|September 19, 2007
A replica exchange Monte Carlo algorithm for protein folding in the HP modelChris Thachuk, Alena Shmygelska, Holger H HoosBioinformatics (Oxford, England)|June 18, 2005
Search for folding nuclei in native protein structuresAlena ShmygelskaProceedings of the National Academy of Sciences of the United States of America|January 28, 2009
Generalized ensemble methods for de novo structure predictionAlena Shmygelska, Michael LevittPlos One|October 8, 2011
Adaptation of organisms by resonance of RNA transcription with the cellular redox cycleViktor Stolc, Alena Shmygelska, Yuri GrikoBMC Bioinformatics|April 27, 2013
Ensemble-based prediction of RNA secondary structuresNima Aghaeepour, Holger H HoosBMC Bioinformatics|February 3, 2012
Analysis of energy-based algorithms for RNA secondary structure predictionMonir Hajiaghayi, Anne Condon, Holger H HoosBioinformatics (Oxford, England)|May 23, 2003
Inference of transcriptional regulation relationships from gene expression dataAndrew T Kwon, Holger H Hoos, Raymond NgBMC Bioinformatics|February 3, 2007
Computational RNA secondary structure design: empirical complexity and improved methodsRosalía Aguirre-Hernández, Holger H Hoos, Anne CondonPageof 4