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Epigenetics
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March 16, 2021
Cell-free DNA methylome profiling by MBD-seq with ultra-low input
Jinyong Huang, Alex C Soupir, Liang Wang
Biorxiv : the Preprint Server for Biology
|
July 16, 2025
Exact Expectation of Complete Spatial Randomness for Nearest Neighbor <i>G</i>(<i>r</i>): A Scalable Alternative to Permutations
Alex C Soupir, Brandon J Manley, Lauren C Peres, et al.
Journal of Open Source Software
|
April 6, 2026
FastPCA: An R package for fast singular value decomposition
Kimberly R Ward, Mitchell Hayes, Lauren C Peres, et al.
Scientific Reports
|
May 14, 2024
Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models
Oscar E Ospina, Alex C Soupir, Roberto Manjarres-Betancur, et al.
Bioinformatics Advances
|
November 18, 2024
mxfda: a comprehensive toolkit for functional data analysis of single-cell spatial data
Julia Wrobel, Alex C Soupir, Mitchell T Hayes, et al.
Bioinformatics (Oxford, England)
|
March 8, 2022
spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics
Oscar E Ospina, Christopher M Wilson, Alex C Soupir, et al.
Softwarex
|
March 30, 2026
scSpatialSIM: a simulator of spatial single-cell molecular data
Alex C Soupir, Julia Wrobel, Jordan H Creed, et al.
Plos Computational Biology
|
March 2, 2022
Tumor immune cell clustering and its association with survival in African American women with ovarian cancer
Christopher Wilson, Alex C Soupir, Ram Thapa, et al.
Cancers
|
November 27, 2021
Cancer Detection and Classification by CpG Island Hypermethylation Signatures in Plasma Cell-Free DNA
Jinyong Huang, Alex C Soupir, Brian D Schlick, et al.
Statistics and Data Science in Imaging
|
March 7, 2025
Benchmarking Spatial Co-Localization Methods for Single-Cell Multiplex Imaging Data with Applications to High-Grade Serous Ovarian and Triple Negative Breast Cancer
Alex C Soupir, Ishaan V Gadiyar, Bryan R Helm, et al.
Page
of 3
Search research articles
Search
Showing results (1-10 of 26) with videos related to
Sort By:
Page
of 3
Epigenetics
|
March 16, 2021
Cell-free DNA methylome profiling by MBD-seq with ultra-low input
Jinyong Huang, Alex C Soupir, Liang Wang
Biorxiv : the Preprint Server for Biology
|
July 16, 2025
Exact Expectation of Complete Spatial Randomness for Nearest Neighbor <i>G</i>(<i>r</i>): A Scalable Alternative to Permutations
Alex C Soupir, Brandon J Manley, Lauren C Peres, et al.
Journal of Open Source Software
|
April 6, 2026
FastPCA: An R package for fast singular value decomposition
Kimberly R Ward, Mitchell Hayes, Lauren C Peres, et al.
Scientific Reports
|
May 14, 2024
Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models
Oscar E Ospina, Alex C Soupir, Roberto Manjarres-Betancur, et al.
Bioinformatics Advances
|
November 18, 2024
mxfda: a comprehensive toolkit for functional data analysis of single-cell spatial data
Julia Wrobel, Alex C Soupir, Mitchell T Hayes, et al.
Bioinformatics (Oxford, England)
|
March 8, 2022
spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics
Oscar E Ospina, Christopher M Wilson, Alex C Soupir, et al.
Softwarex
|
March 30, 2026
scSpatialSIM: a simulator of spatial single-cell molecular data
Alex C Soupir, Julia Wrobel, Jordan H Creed, et al.
Plos Computational Biology
|
March 2, 2022
Tumor immune cell clustering and its association with survival in African American women with ovarian cancer
Christopher Wilson, Alex C Soupir, Ram Thapa, et al.
Cancers
|
November 27, 2021
Cancer Detection and Classification by CpG Island Hypermethylation Signatures in Plasma Cell-Free DNA
Jinyong Huang, Alex C Soupir, Brian D Schlick, et al.
Statistics and Data Science in Imaging
|
March 7, 2025
Benchmarking Spatial Co-Localization Methods for Single-Cell Multiplex Imaging Data with Applications to High-Grade Serous Ovarian and Triple Negative Breast Cancer
Alex C Soupir, Ishaan V Gadiyar, Bryan R Helm, et al.
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of 3