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BMC Structural Biology|February 28, 2013
Designing and benchmarking the MULTICOM protein structure prediction systemJilong Li, Xin Deng, Jesse Eickholt, et al.Proteins|May 15, 2015
CONFOLD: Residue-residue contact-guided ab initio protein foldingBadri Adhikari, Debswapna Bhattacharya, Renzhi Cao, et al.BMC Bioinformatics|April 30, 2014
SMOQ: a tool for predicting the absolute residue-specific quality of a single protein model with support vector machinesRenzhi Cao, Zheng Wang, Yiheng Wang, et al.Computational and Structural Biotechnology Journal|July 21, 2025
A labeled dataset for AI-based cryo-EM map enhancementNabin Giri, Xiao Chen, Liguo Wang, et al.Briefings in Bioinformatics|June 11, 2024
CryoSegNet: accurate cryo-EM protein particle picking by integrating the foundational AI image segmentation model and attention-gated U-NetRajan Gyawali, Ashwin Dhakal, Liguo Wang, et al.Scientific Reports|August 18, 2023
Crystal structure of domain of unknown function 507 (DUF507) reveals a new protein foldCole E McKay, Jianlin Cheng, John J TannerBiomolecules|May 24, 2024
A Survey of Deep Learning Methods for Estimating the Accuracy of Protein Quaternary Structure ModelsXiao Chen, Jian Liu, Nolan Park, et al.BMC Bioinformatics|December 29, 2020
Auto3DCryoMap: an automated particle alignment approach for 3D cryo-EM density map reconstructionAdil Al-Azzawi, Anes Ouadou, Ye Duan, et al.Briefings in Bioinformatics|December 1, 2021
Artificial intelligence in the prediction of protein-ligand interactions: recent advances and future directionsAshwin Dhakal, Cole McKay, John J Tanner, et al.International Journal of Molecular Sciences|April 25, 2020
Bioinformatics Methods for Mass Spectrometry-Based Proteomics Data AnalysisChen Chen, Jie Hou, John J Tanner, et al.Pageof 30