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Biorxiv : the Preprint Server for Biology|April 17, 2023
CAMP: A modular metagenomics analysis system for integrated multi-step data explorationLauren Mak, Braden Tierney, Cynthia Ronkowski, et al.The Science of the Total Environment|July 25, 2025
Long term assessment of SARS-CoV-2 in wastewater and the transition to evaluate additional viral targetsAyaaz Amirali, Mark E Sharkey, Shruti Choudhary, et al.NAR Genomics and Bioinformatics|January 19, 2026
CAMP: a modular metagenomics analysis system for integrated multistep data explorationLauren Mak, Braden Tierney, Wei Wei, et al.Genome Biology|January 12, 2026
SARS-CoV-2 wastewater genomic surveillance: approaches, challenges, and opportunitiesViorel Munteanu, Michael A Saldana, David Dreifuss, et al.Biorxiv : the Preprint Server for Biology|January 25, 2022
Selection analysis identifies unusual clustered mutational changes in Omicron lineage BA.1 that likely impact Spike functionDarren P Martin, Spyros Lytras, Alexander G Lucaci, et al.Cell Genomics|July 27, 2026
On the ancestry and evolution of the extinct dire wolfGregory L Gedman, Kathleen Morrill Pirovich, Jonas Oppenheimer, et al.Molecular Biology and Evolution|March 24, 2022
Selection Analysis Identifies Clusters of Unusual Mutational Changes in Omicron Lineage BA.1 That Likely Impact Spike FunctionDarren P Martin, Spyros Lytras, Alexander G Lucaci, et al.Nature Communications|September 27, 2024
Towards geospatially-resolved public-health surveillance via wastewater sequencingBraden T Tierney, Jonathan Foox, Krista A Ryon, et al.Nature Communications|July 16, 2026
Diversity and distinctive characteristics of the global RNA virome in urban and peri-urban environmentsZihao Gao, Jun Wu, Alexander G Lucaci, et al.Nature|January 18, 2022
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern AfricaRaquel Viana, Sikhulile Moyo, Daniel G Amoako, et al.Pageof 4