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Scientific Reports|April 19, 2016
Control of complex networks requires both structure and dynamicsAlexander J Gates, Luis M Rocha
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics|January 15, 2016
Modularity and the spread of perturbations in complex dynamical systemsArtemy Kolchinsky, Alexander J Gates, Luis M Rocha
Proceedings of the National Academy of Sciences of the United States of America|March 19, 2021
The effective graph reveals redundancy, canalization, and control pathways in biochemical regulation and signalingAlexander J Gates, Rion Brattig Correia, Xuan Wang, et al.
Frontiers in Physiology|August 30, 2018
CANA: A Python Package for Quantifying Control and Canalization in Boolean NetworksRion B Correia, Alexander J Gates, Xuan Wang, et al.
Arxiv|April 10, 2023
Dynamical Modularity in Automata Models of Biochemical NetworksThomas Parmer, Luis M Rocha
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics|March 5, 2009
Stochastic model for scale-free networks with cutoffsTiago Simas, Luis M Rocha
Artificial Life|November 9, 2016
The Structure of Ontogenies in a Model ProtocellEran Agmon, Alexander J Gates, Randall D Beer
Proceedings of the National Academy of Sciences of the United States of America|November 20, 2023
A network-based normalized impact measure reveals successful periods of scientific discovery across disciplineQing Ke, Alexander J Gates, Albert-László Barabási
Journal of Physics. Complexity|August 12, 2024
The ultrametric backbone is the union of all minimum spanning forestsJordan C Rozum, Luis M Rocha
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