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Alexander Karollus

Showing results (1-10 of 11) with videos related to

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Plos Computational Biology|May 10, 2021
Predicting mean ribosome load for 5'UTR of any length using deep learningAlexander Karollus, Žiga Avsec, Julien Gagneur
Genome Biology|March 27, 2023
Current sequence-based models capture gene expression determinants in promoters but mostly ignore distal enhancersAlexander Karollus, Thomas Mauermeier, Julien Gagneur
Bioinformatics (Oxford, England)|September 4, 2025
Flashzoi: An enhanced Borzoi for accelerated genomic analysisJohannes C Hingerl, Alexander Karollus, Julien Gagneur
Bioinformatics (Oxford, England)|January 28, 2023
The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell dataDennis Hecker, Fatemeh Behjati Ardakani, Alexander Karollus, et al.
Genome Biology|April 2, 2024
Species-aware DNA language models capture regulatory elements and their evolutionAlexander Karollus, Johannes Hingerl, Dennis Gankin, et al.
Nature Methods|October 22, 2025
scooby: modeling multimodal genomic profiles from DNA sequence at single-cell resolutionJohannes C Hingerl, Laura D Martens, Alexander Karollus, et al.
Biorxiv : the Preprint Server for Biology|September 30, 2024
scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolutionJohannes C Hingerl, Laura D Martens, Alexander Karollus, et al.
Nature Genetics|October 10, 2025
Nucleotide dependency analysis of genomic language models detects functional elementsPedro Tomaz da Silva, Alexander Karollus, Johannes Hingerl, et al.
Nature Methods|May 25, 2026
Decoding sequence determinants of gene expression in diverse cellular and disease statesAvantika Lal, Alexander Karollus, Laura Gunsalus, et al.
Scientific Reports|March 8, 2024
Viral genome sequencing to decipher in-hospital SARS-CoV-2 transmission eventsElisabeth Esser, Eva C Schulte, Alexander Graf, et al.
Pageof 2

Showing results (1-10 of 11) with videos related to

Sort By:
Pageof 2
Plos Computational Biology|May 10, 2021
Predicting mean ribosome load for 5'UTR of any length using deep learningAlexander Karollus, Žiga Avsec, Julien Gagneur
Genome Biology|March 27, 2023
Current sequence-based models capture gene expression determinants in promoters but mostly ignore distal enhancersAlexander Karollus, Thomas Mauermeier, Julien Gagneur
Bioinformatics (Oxford, England)|September 4, 2025
Flashzoi: An enhanced Borzoi for accelerated genomic analysisJohannes C Hingerl, Alexander Karollus, Julien Gagneur
Bioinformatics (Oxford, England)|January 28, 2023
The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell dataDennis Hecker, Fatemeh Behjati Ardakani, Alexander Karollus, et al.
Genome Biology|April 2, 2024
Species-aware DNA language models capture regulatory elements and their evolutionAlexander Karollus, Johannes Hingerl, Dennis Gankin, et al.
Nature Methods|October 22, 2025
scooby: modeling multimodal genomic profiles from DNA sequence at single-cell resolutionJohannes C Hingerl, Laura D Martens, Alexander Karollus, et al.
Biorxiv : the Preprint Server for Biology|September 30, 2024
scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolutionJohannes C Hingerl, Laura D Martens, Alexander Karollus, et al.
Nature Genetics|October 10, 2025
Nucleotide dependency analysis of genomic language models detects functional elementsPedro Tomaz da Silva, Alexander Karollus, Johannes Hingerl, et al.
Nature Methods|May 25, 2026
Decoding sequence determinants of gene expression in diverse cellular and disease statesAvantika Lal, Alexander Karollus, Laura Gunsalus, et al.
Scientific Reports|March 8, 2024
Viral genome sequencing to decipher in-hospital SARS-CoV-2 transmission eventsElisabeth Esser, Eva C Schulte, Alexander Graf, et al.
Pageof 2