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BMC Genomics|May 22, 2020
Gene expression of functionally-related genes coevolves across fungal species: detecting coevolution of gene expression using phylogenetic comparative methodsAlexander L Cope, Brian C O'Meara, Michael A GilchristEuropean Urology Oncology|December 18, 2025
Clinical Evaluation of a Novel Deintensified Surveillance Protocol for Low-risk Non-muscle-invasive Bladder Cancer: A Prospective Study in 250 PatientsChandrarajan Premal Shah, Jennifer Gray, Tanya Lord-McKenzie, et al.Communications Biology|April 13, 2023
NADcapPro and circNC: methods for accurate profiling of NAD and non-canonical RNA caps in eukaryotesSunny Sharma, Jun Yang, John Favate, et al.Bioinformatics (Oxford, England)|February 14, 2022
riboviz 2: a flexible and robust ribosome profiling data analysis and visualization workflowAlexander L Cope, Felicity Anderson, John Favate, et al.Msphere|June 7, 2019
Simultaneous Ribosome Profiling of Human Host Cells Infected with Toxoplasma gondiiMichael J Holmes, Premal Shah, Ronald C Wek, et al.Cell|June 25, 2013
Rate-limiting steps in yeast protein translationPremal Shah, Yang Ding, Malwina Niemczyk, et al.Genome Biology and Evolution|May 16, 2015
Estimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data AloneMichael A Gilchrist, Wei-Chen Chen, Premal Shah, et al.Nature|February 19, 2013
Non-optimal codon usage is a mechanism to achieve circadian clock conditionalityYao Xu, Peijun Ma, Premal Shah, et al.Evolution; International Journal of Organic Evolution|March 7, 2013
Evidence for repeated loss of selective constraint in rhodopsin of amblyopsid cavefishes (Teleostei: Amblyopsidae)Matthew L Niemiller, Benjamin M Fitzpatrick, Premal Shah, et al.BMC Bioinformatics|October 27, 2017
riboviz: analysis and visualization of ribosome profiling datasetsOana Carja, Tongji Xing, Edward W J Wallace, et al.Pageof 7