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Developmental Dynamics : an Official Publication of the American Association of Anatomists|September 9, 2006
Analysis of pattern precision shows that Drosophila segmentation develops substantial independence from gradients of maternal gene productsDavid M Holloway, Lionel G Harrison, David Kosman, et al.Plos Computational Biology|September 27, 2008
Spatial bistability generates hunchback expression sharpness in the Drosophila embryoFrancisco J P Lopes, Fernando M C Vieira, David M Holloway, et al.Procedia Computer Science|June 23, 2012
Measuring gene expression noise in early Drosophila embryos: nucleus-to-nucleus variabilityNina E Golyandina, David M Holloway, Francisco J P Lopes, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 20, 2022
Problem of Domain/Building Block Preservation in the Evolution of Biological Macromolecules and Evolutionary ComputationAlexander V Spirov, Ekaterina M MyasnikovaPlos One|January 27, 2022
Heuristic algorithms in evolutionary computation and modular organization of biological macromolecules: Applications to in vitro evolutionAlexander V Spirov, Ekaterina M MyasnikovaBio Systems|December 5, 2020
Modeling SELEX for regulatory regions using Royal Road and Royal Staircase fitness functionsAnton V Eremeev, Alexander V SpirovPlos Computational Biology|February 10, 2011
Gene expression noise in spatial patterning: hunchback promoter structure affects noise amplitude and distribution in Drosophila segmentationDavid M Holloway, Francisco J P Lopes, Luciano da Fontoura Costa, et al.Nucleic Acids Research|December 26, 2001
HOX Pro DB: the functional genomics of hox ensemblesAlexander V Spirov, Mikhail Borovsky, Olesya A SpirovaJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 21, 2021
Quantitative Analysis of the Dynamics of Maternal Gradients in the Early Drosophila EmbryoEkaterina M Myasnikova, Marat A Sabirov, Alexander V SpirovDevelopmental Biology|July 31, 2012
The role of Bicoid cooperative binding in the patterning of sharp borders in Drosophila melanogasterFrancisco J P Lopes, Alexander V Spirov, Paulo M BischPageof 4