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F1000Research|July 18, 2022
Positional weight matrices have sufficient prediction power for analysis of noncoding variantsAlexandr Boytsov, Sergey Abramov, Vsevolod J Makeev, et al.
Nature Communications|February 18, 2025
Statistical framework for calling allelic imbalance in high-throughput sequencing dataAndrey Buyan, Georgy Meshcheryakov, Viacheslav Safronov, et al.
Nature Communications|May 13, 2021
Landscape of allele-specific transcription factor binding in the human genomeSergey Abramov, Alexandr Boytsov, Daria Bykova, et al.
Nucleic Acids Research|April 21, 2022
ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPsAlexandr Boytsov, Sergey Abramov, Ariuna Z Aiusheeva, et al.
Nucleic Acids Research|November 16, 2023
HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factorsIlya E Vorontsov, Irina A Eliseeva, Arsenii Zinkevich, et al.
Biorxiv : the Preprint Server for Biology|November 28, 2024
Perspectives on Codebook: sequence specificity of uncharacterized human transcription factorsArttu Jolma, Kaitlin U Laverty, Ali Fathi, et al.
Nature|August 5, 2026
An expanded codebook of human transcription factor DNA-binding specificityArttu Jolma, Kaitlin U Laverty, Ali Fathi, et al.
Communications Biology|November 7, 2025
Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factorsIlya E Vorontsov, Ivan Kozin, Sergey Abramov, et al.
Biorxiv : the Preprint Server for Biology|November 28, 2024
Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factorsIlya E Vorontsov, Ivan Kozin, Sergey Abramov, et al.
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