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Proteins|July 14, 2025
Biomolecular Interaction Prediction in the Pre- and Post-AlphaFold Era: The 8th CAPRI EvaluationMarc F Lensink, Nessim Raouraoua, Guillaume Brysbaert, et al.Proteins|September 2, 2025
Updates to the CASP Infrastructure in 2024Andriy Kryshtafovych, Maciej Milostan, Marc F Lensink, et al.Methods in Molecular Biology (Clifton, N.J.)|May 1, 2008
Membrane-associated proteins and peptidesMarc F LensinkCurrent Opinion in Structural Biology|February 21, 2006
Flexible protein-protein dockingAlexandre M J J BonvinJournal of Molecular Biology|September 5, 2024
CAPRI-Q: The CAPRI resource evaluating the quality of predicted structures of protein complexesKeeley W Collins, Matthew M Copeland, Guillaume Brysbaert, et al.Methods in Molecular Biology (Clifton, N.J.)|October 22, 2014
Membrane-associated proteins and peptidesMarc F LensinkJournal of Biomolecular NMR|June 1, 2011
Protein-protein HADDocking using exclusively pseudocontact shiftsChristophe Schmitz, Alexandre M J J BonvinStructure (London, England : 1993)|April 13, 2011
A multidomain flexible docking approach to deal with large conformational changes in the modeling of biomolecular complexesEzgi Karaca, Alexandre M J J BonvinMethods in Molecular Biology (Clifton, N.J.)|July 2, 2025
Ranking Protein-Protein Models with Large Language Models and Graph Neural NetworksXiaotong Xu, Alexandre M J J BonvinBriefings in Bioinformatics|July 12, 2026
AbTune: layer-wise selective fine-tuning of protein language models for antibodiesXiaotong Xu, Alexandre M J J BonvinPageof 31