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IEEE/ACM Transactions on Computational Biology and Bioinformatics|August 17, 2018
Incorporating Prior Knowledge about Genetic Variants into the Analysis of Genetic Association Data: An Empirical Bayes ApproachAli Karimnezhad, David R BickelPlos One|September 21, 2017
The performance of a new local false discovery rate method on tests of association between coronary artery disease (CAD) and genome-wide genetic variantsShuyan Mei, Ali Karimnezhad, Marie Forest, et al.Bioinformatics Advances|January 26, 2023
More accurate estimation of cell composition in bulk expression through robust integration of single-cell informationAli KarimnezhadJournal of Theoretical Biology|September 30, 2018
Allelic frequency estimation in presence of uncertain priorsAli Karimnezhad, Fahimeh MoradiScientific Reports|January 17, 2024
Empirical Bayes single nucleotide variant-calling for next-generation sequencing dataAli Karimnezhad, Theodore J PerkinsBiometrics|October 1, 2010
Estimating the null distribution to adjust observed confidence levels for genome-scale screeningDavid R BickelBioinformatics (Oxford, England)|May 2, 2003
Robust cluster analysis of microarray gene expression data with the number of clusters determined biologicallyDavid R BickelStatistical Applications in Genetics and Molecular Biology|April 14, 2012
Empirical Bayes interval estimates that are conditionally equal to unadjusted confidence intervals or to default prior credibility intervalsDavid R BickelStatistical Applications in Genetics and Molecular Biology|May 2, 2006
Error-rate and decision-theoretic methods of multiple testing: which genes have high objective probabilities of differential expression?David R BickelMolecular Phylogenetics and Evolution|January 1, 2023
Propagating uncertainty about molecular evolution models and prior distributions to phylogenetic treesDavid R BickelPageof 3