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BMC Genomics|May 10, 2011
Genome-scale computational analysis of DNA curvature and repeats in Arabidopsis and rice uncovers plant-specific genomic propertiesAli Masoudi-Nejad, Sara Movahedi, Ruy JáureguiGenomics|June 12, 2021
Revealing transcriptional and post-transcriptional regulatory mechanisms of γ-glutamyl transferase and keratin isoforms as novel cooperative biomarkers in low-grade glioma and glioblastoma multiformeFaezeh Mottaghitalab, Hossein Lanjanian, Ali Masoudi-NejadSeminars in Cell & Developmental Biology|December 25, 2015
Information theory in systems biology. Part I: Gene regulatory and metabolic networksZaynab Mousavian, Kaveh Kavousi, Ali Masoudi-NejadGene|October 9, 2017
Comparison of gene co-expression networks in Pseudomonas aeruginosa and Staphylococcus aureus reveals conservation in some aspects of virulenceNazanin Hosseinkhan, Zaynab Mousavian, Ali Masoudi-NejadExperimental and Molecular Pathology|December 18, 2019
Introducing a panel for early detection of lung adenocarcinoma by using data integration of genomics, epigenomics, transcriptomics and proteomicsNiloofar Haghjoo, Ali Moeini, Ali Masoudi-NejadSeminars in Cell & Developmental Biology|December 23, 2015
Information theory in systems biology. Part II: protein-protein interaction and signaling networksZaynab Mousavian, José Díaz, Ali Masoudi-NejadGenes & Genomics|September 7, 2018
Sequence-based 5-mers highly correlated to epigenetic modifications in genes interactionsDariush Salimi, Ali Moeini, Ali Masoudi-NejadCurrent Genomics|December 2, 2014
Analysis of Genome-scale Expression Network in Four Major Bacterial Residents of Cystic Fibrosis LungNazanin Hosseinkhan, Peyman Zarrineh, Ali Masoudi-NejadCurrent Genomics|April 25, 2019
CatbNet: A Multi Network Analyzer for Comparing and Analyzing the Topology of Biological NetworksEhsan Pournoor, Naser Elmi, Ali Masoudi-NejadGenomics|February 26, 2017
Candidate novel long noncoding RNAs, MicroRNAs and putative drugs for Parkinson's disease using a robust and efficient genome-wide association studyZahra Mortezaei, Hossein Lanjanian, Ali Masoudi-NejadPageof 14