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IEEE/ACM Transactions on Computational Biology and Bioinformatics
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June 11, 2019
Optimal Bayesian Transfer Learning for Count Data
Alireza Karbalayghareh, Xiaoning Qian, Edward R Dougherty
Genome Research
|
April 9, 2022
Chromatin interaction-aware gene regulatory modeling with graph attention networks
Alireza Karbalayghareh, Merve Sahin, Christina S Leslie
BMC Systems Biology
|
March 29, 2018
Intrinsically Bayesian robust classifier for single-cell gene expression trajectories in gene regulatory networks
Alireza Karbalayghareh, Ulisses Braga-Neto, Edward R Dougherty
IEEE/ACM Transactions on Computational Biology and Bioinformatics
|
October 21, 2017
Classification of Single-Cell Gene Expression Trajectories from Incomplete and Noisy Data
Alireza Karbalayghareh, Ulisses Braga-Neto, Edward R Dougherty
IEEE/ACM Transactions on Computational Biology and Bioinformatics
|
October 15, 2016
Classification of State Trajectories in Gene Regulatory Networks
Alireza Karbalayghareh, Ulisses Braga-Neto, Jianping Hua, et al.
Biorxiv : the Preprint Server for Biology
|
July 3, 2026
Deep dynamical models of single-cell multiomic velocities predict loss-of-function and rescue perturbations in B cells
Alireza Karbalayghareh, Benedikt Pelzer, Christopher R Chin, et al.
Genome Biology
|
June 6, 2023
Epiphany: predicting Hi-C contact maps from 1D epigenomic signals
Rui Yang, Arnav Das, Vianne R Gao, et al.
Biorxiv : the Preprint Server for Biology
|
August 7, 2023
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
Vianne R Gao, Rui Yang, Arnav Das, et al.
Nature Communications
|
November 2, 2024
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
Vianne R Gao, Rui Yang, Arnav Das, et al.
Biorxiv : the Preprint Server for Biology
|
November 28, 2023
An encyclopedia of enhancer-gene regulatory interactions in the human genome
Andreas R Gschwind, Kristy S Mualim, Alireza Karbalayghareh, et al.
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of 2
Search research articles
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Showing results (1-10 of 12) with videos related to
Sort By:
Page
of 2
IEEE/ACM Transactions on Computational Biology and Bioinformatics
|
June 11, 2019
Optimal Bayesian Transfer Learning for Count Data
Alireza Karbalayghareh, Xiaoning Qian, Edward R Dougherty
Genome Research
|
April 9, 2022
Chromatin interaction-aware gene regulatory modeling with graph attention networks
Alireza Karbalayghareh, Merve Sahin, Christina S Leslie
BMC Systems Biology
|
March 29, 2018
Intrinsically Bayesian robust classifier for single-cell gene expression trajectories in gene regulatory networks
Alireza Karbalayghareh, Ulisses Braga-Neto, Edward R Dougherty
IEEE/ACM Transactions on Computational Biology and Bioinformatics
|
October 21, 2017
Classification of Single-Cell Gene Expression Trajectories from Incomplete and Noisy Data
Alireza Karbalayghareh, Ulisses Braga-Neto, Edward R Dougherty
IEEE/ACM Transactions on Computational Biology and Bioinformatics
|
October 15, 2016
Classification of State Trajectories in Gene Regulatory Networks
Alireza Karbalayghareh, Ulisses Braga-Neto, Jianping Hua, et al.
Biorxiv : the Preprint Server for Biology
|
July 3, 2026
Deep dynamical models of single-cell multiomic velocities predict loss-of-function and rescue perturbations in B cells
Alireza Karbalayghareh, Benedikt Pelzer, Christopher R Chin, et al.
Genome Biology
|
June 6, 2023
Epiphany: predicting Hi-C contact maps from 1D epigenomic signals
Rui Yang, Arnav Das, Vianne R Gao, et al.
Biorxiv : the Preprint Server for Biology
|
August 7, 2023
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
Vianne R Gao, Rui Yang, Arnav Das, et al.
Nature Communications
|
November 2, 2024
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
Vianne R Gao, Rui Yang, Arnav Das, et al.
Biorxiv : the Preprint Server for Biology
|
November 28, 2023
An encyclopedia of enhancer-gene regulatory interactions in the human genome
Andreas R Gschwind, Kristy S Mualim, Alireza Karbalayghareh, et al.
Page
of 2