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Nature Computational Science|August 13, 2025
Engineering morphogenesis of cell clusters with differentiable programmingRamya Deshpande, Francesco Mottes, Ariana-Dalia Vlad, et al.Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|October 8, 2019
Emergent microscale gradients give rise to metabolic cross-feeding and antibiotic tolerance in clonal bacterial populationsAlma Dal Co, Simon van Vliet, Martin AckermannCell Systems|February 16, 2023
Spatial self-organization of metabolism in microbial systems: A matter of enzymes and chemicalsAlma Dal Co, Martin Ackermann, Simon van VlietJournal of the Royal Society, Interface|July 11, 2019
Metabolic activity affects the response of single cells to a nutrient switch in structured populationsAlma Dal Co, Martin Ackermann, Simon van VlietProceedings of the National Academy of Sciences of the United States of America|October 30, 2023
Minorities drive growth resumption in cross-feeding microbial communitiesGabriele Micali, Alyson M Hockenberry, Alma Dal Co, et al.Nucleic Acids Research|February 10, 2017
Stochastic timing in gene expression for simple regulatory strategiesAlma Dal Co, Marco Cosentino Lagomarsino, Michele Caselle, et al.Methods in Molecular Biology (Clifton, N.J.)|September 30, 2021
Microfluidics for Single-Cell Study of Antibiotic Tolerance and Persistence Induced by Nutrient LimitationStefany Moreno-Gámez, Alma Dal Co, Simon van Vliet, et al.Plos Computational Biology|March 4, 2022
Global dynamics of microbial communities emerge from local interaction rulesSimon van Vliet, Christoph Hauert, Kyle Fridberg, et al.Nature Ecology & Evolution|March 24, 2020
Publisher Correction: Short-range interactions govern the dynamics and functions of microbial communitiesAlma Dal Co, Simon van Vliet, Daniel Johannes Kiviet, et al.Pageof 13