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Nature Communications|December 12, 2025
Mass spectrometry-based profiling of single-cell histone post-translational modifications to dissect chromatin heterogeneityRonald Cutler, Laura Corveleyn, Claudia Ctortecka, et al.
Nature Methods|November 17, 2020
Avant-garde: an automated data-driven DIA data curation toolAlvaro Sebastian Vaca Jacome, Ryan Peckner, Nicholas Shulman, et al.
Molecular & Cellular Proteomics : MCP|May 4, 2023
Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass SpectrometryKshiti Meera Phulphagar, Claudia Ctortecka, Alvaro Sebastian Vaca Jacome, et al.
Nucleic Acids Research|December 26, 2007
RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigationSocorro Gama-Castro, Verónica Jiménez-Jacinto, Martín Peralta-Gil, et al.
Molecular & Cellular Proteomics : MCP|January 9, 2025
High-Throughput Determination of Exchange Rates of Unmodified and PTM-Containing Peptides Using HX-MSJamie A Moroco, Alvaro Sebastian Vaca Jacome, Pierre Michel Jean Beltran, et al.
Molecular Cell|October 7, 2022
Calcineurin dephosphorylates topoisomerase IIβ and regulates the formation of neuronal-activity-induced DNA breaksIlse Delint-Ramirez, Lahiri Konada, Lance Heady, et al.
Nucleic Acids Research|November 10, 2020
Gramene 2021: harnessing the power of comparative genomics and pathways for plant researchMarcela K Tello-Ruiz, Sushma Naithani, Parul Gupta, et al.
Patterns (New York, N.Y.)|June 28, 2021
Causal interactions from proteomic profiles: Molecular data meet pathway knowledgeÖzgün Babur, Augustin Luna, Anil Korkut, et al.
Nucleic Acids Research|October 11, 2021
The Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 dataNishadi H De Silva, Jyothish Bhai, Marc Chakiachvili, et al.
Nature Communications|December 21, 2017
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structureSean P Gordon, Bruno Contreras-Moreira, Daniel P Woods, et al.
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