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Trends in Plant Science|September 18, 2012
Plastid non-coding RNAs: emerging candidates for gene regulationAmber M Hotto, Arnaud Germain, David B SternWiley Interdisciplinary Reviews. RNA|March 29, 2013
RNA processing and decay in plastidsArnaud Germain, Amber M Hotto, Alice Barkan, et al.Nucleic Acids Research|November 17, 2019
Systematic sequencing of chloroplast transcript termini from Arabidopsis thaliana reveals >200 transcription initiation sites and the extensive imprints of RNA-binding proteins and secondary structuresBenoît Castandet, Arnaud Germain, Amber M Hotto, et al.Plants (Basel, Switzerland)|March 11, 2020
Plant Ribonuclease J: An Essential Player in Maintaining Chloroplast RNA Quality Control for Gene ExpressionAmber M Hotto, David B Stern, Gadi SchusterBMC Plant Biology|October 6, 2010
Overexpression of a natural chloroplast-encoded antisense RNA in tobacco destabilizes 5S rRNA and retards plant growthAmber M Hotto, Zoe E Huston, David B SternJournal of Experimental Botany|June 27, 2025
The α form of Rubisco Activase supports photosynthesis during heat stress in the absence of the β form in Setaria viridisAmber M Hotto, Sarah Gartner, Kathryn Eshenour, et al.FEBS Letters|August 20, 2013
Strand-specific RNA sequencing uncovers chloroplast ribonuclease functionsBenoît Castandet, Amber M Hotto, Zhangjun Fei, et al.G3 (Bethesda, Md.)|July 13, 2016
ChloroSeq, an Optimized Chloroplast RNA-Seq Bioinformatic Pipeline, Reveals Remodeling of the Organellar Transcriptome Under Heat StressBenoît Castandet, Amber M Hotto, Susan R Strickler, et al.RNA (New York, N.Y.)|December 15, 2010
Overaccumulation of the chloroplast antisense RNA AS5 is correlated with decreased abundance of 5S rRNA in vivo and inefficient 5S rRNA maturation in vitroRobert E Sharwood, Amber M Hotto, Thomas J Bollenbach, et al.G3 (Bethesda, Md.)|March 3, 2012
Unexpected Diversity of Chloroplast Noncoding RNAs as Revealed by Deep Sequencing of the Arabidopsis TranscriptomeAmber M Hotto, Robert J Schmitz, Zhangjun Fei, et al.Pageof 11