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Biorxiv : the Preprint Server for Biology|September 11, 2024
Multi-scale reactor designs extend the physical limits of fixationAmir Akbari, Bernhard O PalssonPlos Computational Biology|August 17, 2022
Positively charged mineral surfaces promoted the accumulation of organic intermediates at the origin of metabolismAmir Akbari, Bernhard O PalssonProceedings of the National Academy of Sciences of the United States of America|May 1, 2023
Metabolic homeostasis and growth in abiotic cellsAmir Akbari, Bernhard O PalssonMsystems|January 23, 2024
A data-driven approach for timescale decomposition of biochemical reaction networksAmir Akbari, Zachary B Haiman, Bernhard O PalssonBiorxiv : the Preprint Server for Biology|September 4, 2023
A data-driven approach for timescale decomposition of biochemical reaction networksAmir Akbari, Zachary B Haiman, Bernhard O PalssonNature Communications|May 27, 2021
The quantitative metabolome is shaped by abiotic constraintsAmir Akbari, James T Yurkovich, Daniel C Zielinski, et al.Plos Computational Biology|January 22, 2024
Inferred regulons are consistent with regulator binding sequences in E. coliSizhe Qiu, Xinlong Wan, Yueshan Liang, et al.Molecular Systems Biology|November 29, 2019
Expanding the uses of genome-scale models with protein structuresNathan Mih, Bernhard O PalssonBMC Systems Biology|May 2, 2009
Using in silico models to simulate dual perturbation experiments: procedure development and interpretation of outcomesNeema Jamshidi, Bernhard O PalssonBiophysical Journal|June 28, 2003
The convex basis of the left null space of the stoichiometric matrix leads to the definition of metabolically meaningful poolsIman Famili, Bernhard O PalssonPageof 43