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Plos One|June 20, 2020
BiomMiner: An advanced exploratory microbiome analysis and visualization pipelineAmirhossein Shamsaddini, Kimia Dadkhah, Patrick M Gillevet
Science Signaling|February 3, 2026
The fetal trophoblast cell marker HLA-G activates a type I interferon response in primary NK cells through the receptor KIR2DL4Sumati Rajagopalan, Saurav Majumder, Christiana Wang, et al.
Database : the Journal of Biological Databases and Curation|March 27, 2014
A framework for organizing cancer-related variations from existing databases, publications and NGS data using a High-performance Integrated Virtual Environment (HIVE)Tsung-Jung Wu, Amirhossein Shamsaddini, Yang Pan, et al.
Nucleic Acids Research|September 19, 2014
Human germline and pan-cancer variomes and their distinct functional profilesYang Pan, Konstantinos Karagiannis, Haichen Zhang, et al.
BMC Genomics|October 23, 2014
Census-based rapid and accurate metagenome taxonomic profilingAmirhossein Shamsaddini, Yang Pan, W Evan Johnson, et al.
Emerging Microbes & Infections|November 2, 2017
Comparative genomic analysis of two emergent human adenovirus type 14 respiratory pathogen isolates in China reveals similar yet divergent genomesQiwei Zhang, Shuping Jing, Zetao Cheng, et al.
Mediators of Inflammation|May 11, 2013
Expression of inflammation-related genes is altered in gastric tissue of patients with advanced stages of NAFLDRohini Mehta, Aybike Birerdinc, Arpan Neupane, et al.
Journal of Translational Medicine|June 1, 2013
Molecular signature of adipose tissue in patients with both non-alcoholic fatty liver disease (NAFLD) and polycystic ovarian syndrome (PCOS)Ancha Baranova, Thuy Phuong Tran, Arian Afendy, et al.
Medrxiv : the Preprint Server for Health Sciences|September 19, 2025
Intrathecally expanded GZMK+/GZMH+ CD8 T cells targeting EBV antigens may reduce severity of Multiple SclerosisShinji Ashida, Peter Kosa, Francisco Otaizo-Carrasquero, et al.
Gut Microbes|August 4, 2021
Distinct gut microbial compositional and functional changes associated with impaired inhibitory control in patients with cirrhosisJasmohan S Bajaj, Amirhossein Shamsaddini, Andrew Fagan, et al.
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