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Nature Genetics|September 8, 2025
Robust and accurate Bayesian inference of genome-wide genealogies for hundreds of genomesYun Deng, Rasmus Nielsen, Yun S SongNature Reviews. Genetics|September 30, 2024
Inference and applications of ancestral recombination graphsRasmus Nielsen, Andrew H Vaughn, Yun DengThe Journal of Heredity|December 26, 2023
The evolutionary dynamics of local adaptations under genetic rescue is determined by mutational load and polygenicityYulin Zhang, Aaron J Stern, Rasmus NielsenJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|March 5, 2003
Bayesian estimation of the number of inversions in the history of two chromosomesThomas L York, Richard Durrett, Rasmus NielsenPlos Genetics|August 22, 2014
A model-based approach for identifying signatures of ancient balancing selection in genetic dataMichael DeGiorgio, Kirk E Lohmueller, Rasmus NielsenBiorxiv : the Preprint Server for Biology|February 24, 2025
A General Framework for Branch Length Estimation in Ancestral Recombination GraphsYun Deng, Yun S Song, Rasmus NielsenMolecular Biology and Evolution|June 19, 2010
Ascertainment biases in SNP chips affect measures of population divergenceAnders Albrechtsen, Finn Cilius Nielsen, Rasmus NielsenTheoretical Population Biology|June 29, 2021
The distribution of waiting distances in ancestral recombination graphsYun Deng, Yun S Song, Rasmus NielsenMolecular Biology and Evolution|June 1, 2022
distAngsd: Fast and Accurate Inference of Genetic Distances for Next-Generation Sequencing DataLei Zhao, Rasmus Nielsen, Thorfinn Sand KorneliussenGenetics|March 17, 2004
Bayesian estimation of genomic distanceRichard Durrett, Rasmus Nielsen, Thomas L YorkPageof 36