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Journal of Molecular Biology|January 17, 2009
Stochastic gating and drug-ribosome interactionsAndrea C Vaiana, Kevin Y SanbonmatsuJournal of Chemical Theory and Computation|December 3, 2015
Spontaneous Formation of KCl Aggregates in Biomolecular Simulations: A Force Field Issue?Pascal Auffinger, Thomas E Cheatham, Andrea C VaianaNucleic Acids Research|June 26, 2015
Dynamic contact network between ribosomal subunits enables rapid large-scale rotation during spontaneous translocationLars V Bock, Christian Blau, Andrea C Vaiana, et al.Elife|March 5, 2019
Automated cryo-EM structure refinement using correlation-driven molecular dynamicsMaxim Igaev, Carsten Kutzner, Lars V Bock, et al.Journal of Computational Chemistry|March 13, 2003
Molecular mechanics force field parameterization of the fluorescent probe rhodamine 6G using automated frequency matchingAndrea C Vaiana, Andreas Schulz, Jürgen Wolfrum, et al.Journal of the American Chemical Society|November 20, 2003
Fluorescence quenching of dyes by tryptophan: interactions at atomic detail from combination of experiment and computer simulationAndrea C Vaiana, Hannes Neuweiler, Andreas Schulz, et al.Nature Structural & Molecular Biology|March 27, 2023
Discrimination between cyclic nucleotides in a cyclic nucleotide-gated ion channelYangang Pan, Emmi Pohjolainen, Philipp A M Schmidpeter, et al.Frontiers in Cellular Neuroscience|December 22, 2023
Different responses of mice and rats hippocampus CA1 pyramidal neurons to in vitro and in vivo-like inputsPaola Vitale, Fabio Librizzi, Andrea C Vaiana, et al.Nature Communications|July 7, 2016
A combined cryo-EM and molecular dynamics approach reveals the mechanism of ErmBL-mediated translation arrestStefan Arenz, Lars V Bock, Michael Graf, et al.Biorxiv : the Preprint Server for Biology|August 2, 2024
Transient Non-local Interactions Dominate the Dynamics of Measles Virus NTAILLillian Otteson, Gabor Nagy, John Kunkel, et al.Pageof 2