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Nature Reviews. Genetics|July 4, 2019
Alternative cleavage and polyadenylation in health and diseaseAndreas J Gruber, Mihaela ZavolanEpigenomics|November 29, 2013
Modulation of epigenetic regulators and cell fate decisions by miRNAsAndreas J Gruber, Mihaela ZavolanNature Methods|September 12, 2018
Terminal exon characterization with TECtool reveals an abundance of cell-specific isoformsAndreas J Gruber, Foivos Gypas, Andrea Riba, et al.Journal of Visualized Experiments : Jove|October 21, 2017
3' End Sequencing Library Preparation with A-seq2Georges Martin, Ralf Schmidt, Andreas J Gruber, et al.Nucleic Acids Research|October 17, 2019
PolyASite 2.0: a consolidated atlas of polyadenylation sites from 3' end sequencingChristina J Herrmann, Ralf Schmidt, Alexander Kanitz, et al.Genome Biology|July 24, 2015
Comparative assessment of methods for the computational inference of transcript isoform abundance from RNA-seq dataAlexander Kanitz, Foivos Gypas, Andreas J Gruber, et al.Genome Research|February 12, 2014
ISMARA: automated modeling of genomic signals as a democracy of regulatory motifsPiotr J Balwierz, Mikhail Pachkov, Phil Arnold, et al.Genome Biology|March 30, 2018
Discovery of physiological and cancer-related regulators of 3' UTR processing with KAPACAndreas J Gruber, Ralf Schmidt, Souvik Ghosh, et al.Nature Communications|May 15, 2024
MAPP unravels frequent co-regulation of splicing and polyadenylation by RNA-binding proteins and their dysregulation in cancerMaciej Bak, Erik van Nimwegen, Ian U Kouzel, et al.Genome Research|July 7, 2016
A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylationAndreas J Gruber, Ralf Schmidt, Andreas R Gruber, et al.Pageof 17