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Evolution; International Journal of Organic Evolution|June 2, 2017
CORRELATED RESPONSE IN THE DEVELOPMENTAL CHOREOGRAPHIES OF THE MOUSE MANDIBLE TO SELECTION FOR BODY COMPOSITIONWilliam R Atchley, David E Cowley, E J Eisen, et al.
Bioinformatics (Oxford, England)|March 19, 2010
Mutual information is critically dependent on prior assumptions: would the correct estimate of mutual information please identify itself?Andrew D Fernandes, Gregory B Gloor
Nucleic Acids Research|January 12, 2010
A unified genetic, computational and experimental framework identifies functionally relevant residues of the homing endonuclease I-BmoIBenjamin P Kleinstiver, Andrew D Fernandes, Gregory B Gloor, et al.
Plos One|July 3, 2010
Identifying and seeing beyond multiple sequence alignment errors using intra-molecular protein covariationRussell J Dickson, Lindi M Wahl, Andrew D Fernandes, et al.
Plos One|September 3, 2011
Divalent metal ion differentially regulates the sequential nicking reactions of the GIY-YIG homing endonuclease I-BmoIBenjamin P Kleinstiver, Wesley Bérubé-Janzen, Andrew D Fernandes, et al.
Plos One|July 12, 2013
ANOVA-like differential expression (ALDEx) analysis for mixed population RNA-SeqAndrew D Fernandes, Jean M Macklaim, Thomas G Linn, et al.
BMC Genomics|October 10, 2008
The SWI/SNF protein ATRX co-regulates pseudoautosomal genes that have translocated to autosomes in the mouse genomeMichael A Levy, Andrew D Fernandes, Deanna C Tremblay, et al.
Algorithms for Molecular Biology : AMB|November 10, 2010
Estimating the evidence of selection and the reliability of inference in unigenic evolutionAndrew D Fernandes, Benjamin P Kleinstiver, David R Edgell, et al.
Plos One|November 5, 2010
Microbiome profiling by illumina sequencing of combinatorial sequence-tagged PCR productsGregory B Gloor, Ruben Hummelen, Jean M Macklaim, et al.
Microbiome|June 10, 2014
Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysisAndrew D Fernandes, Jennifer Ns Reid, Jean M Macklaim, et al.
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