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Bioinformatics (Oxford, England)|October 15, 2011
An assessment of substitution scores for protein profile-profile comparisonXugang Ye, Guoli Wang, Stephen F AltschulAlgorithms for Molecular Biology : AMB|March 29, 2018
Outlier detection in BLAST hitsNidhi Shah, Stephen F Altschul, Mihai PopBMC Bioinformatics|June 26, 2012
Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signaturesAndrew F Neuwald, Christopher J Lanczycki, Aron Marchler-BauerJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 28, 2011
On the inference of dirichlet mixture priors for protein sequence comparisonXugang Ye, Yi-Kuo Yu, Stephen F AltschulJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|December 7, 2010
Compositional adjustment of Dirichlet mixture priorsXugang Ye, Yi-Kuo Yu, Stephen F AltschulBMC Evolutionary Biology|January 8, 2016
Identification and classification of small molecule kinases: insights into substrate recognition and specificityKrishnadev Oruganty, Eric E Talevich, Andrew F Neuwald, et al.Proceedings of the National Academy of Sciences of the United States of America|January 18, 2007
The hallmark of AGC kinase functional divergence is its C-terminal tail, a cis-acting regulatory moduleNatarajan Kannan, Nina Haste, Susan S Taylor, et al.Proceedings of the National Academy of Sciences of the United States of America|December 10, 2003
The compositional adjustment of amino acid substitution matricesYi-Kuo Yu, John C Wootton, Stephen F AltschulJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|January 9, 2013
Dirichlet mixtures, the Dirichlet process, and the structure of protein spaceViet-An Nguyen, Jordan Boyd-Graber, Stephen F AltschulGenome Research|April 3, 2003
Ran's C-terminal, basic patch, and nucleotide exchange mechanisms in light of a canonical structure for Rab, Rho, Ras, and Ran GTPasesAndrew F Neuwald, Natarajan Kannan, Aleksandar Poleksic, et al.Pageof 7