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Proteins|May 21, 2005
Statistical analysis and prediction of protein-protein interfacesAndrew J Bordner, Ruben AbagyanProteins|February 14, 2006
Ab initio prediction of peptide-MHC binding geometry for diverse class I MHC allotypesAndrew J Bordner, Ruben AbagyanBioinformatics (Oxford, England)|March 8, 2005
REVCOM: a robust Bayesian method for evolutionary rate estimationAndrew J Bordner, Ruben AbagyanJournal of Computer-Aided Molecular Design|September 10, 2011
Efficient molecular mechanics simulations of the folding, orientation, and assembly of peptides in lipid bilayers using an implicit atomic solvation modelAndrew J Bordner, Barry Zorman, Ruben AbagyanJournal of Computer-Aided Molecular Design|December 14, 2011
Computational chemistry in 25 yearsRuben AbagyanChemphyschem : a European Journal of Chemical Physics and Physical Chemistry|October 13, 2012
Assessing the accuracy of SAPT(DFT) interaction energies by comparison with experimentally derived noble gas potentials and molecular crystal lattice energiesAndrew J BordnerPlos One|December 29, 2010
Towards universal structure-based prediction of class II MHC epitopes for diverse allotypesAndrew J BordnerBMC Bioinformatics|April 20, 2010
Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein designAndrew J BordnerBioinformatics (Oxford, England)|October 23, 2008
Predicting small ligand binding sites in proteins using backbone structureAndrew J BordnerMethods in Molecular Biology (Clifton, N.J.)|August 22, 2013
Structure-based prediction of Major Histocompatibility Complex (MHC) epitopesAndrew J BordnerPageof 29