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Andrey Alekseenko

Showing results (1-10 of 14) with videos related to

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Frontiers in Molecular Biosciences|November 19, 2019
Improved Modeling of Peptide-Protein Binding Through Global Docking and Accelerated Molecular Dynamics SimulationsJinan Wang, Andrey Alekseenko, Dima Kozakov, et al.
Methods in Molecular Biology (Clifton, N.J.)|July 5, 2020
Protein-Protein and Protein-Peptide Docking with ClusPro ServerAndrey Alekseenko, Mikhail Ignatov, George Jones, et al.
Journal of Computational Chemistry|March 27, 2016
SOP-GPU: influence of solvent-induced hydrodynamic interactions on dynamic structural transitions in protein assembliesAndrey Alekseenko, Olga Kononova, Yaroslav Kholodov, et al.
Journal of Molecular Biology|December 22, 2019
ClusPro LigTBM: Automated Template-based Small Molecule DockingAndrey Alekseenko, Sergei Kotelnikov, Mikhail Ignatov, et al.
Journal of Computer-Aided Molecular Design|November 5, 2017
Protein-ligand docking using FFT based sampling: D3R case studyDzmitry Padhorny, David R Hall, Hanieh Mirzaei, et al.
Journal of Computer-Aided Molecular Design|December 28, 2019
Sampling and refinement protocols for template-based macrocycle docking: 2018 D3R Grand Challenge 4Sergei Kotelnikov, Andrey Alekseenko, Cong Liu, et al.
The Journal of Biological Chemistry|May 31, 2013
Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrinOlga Kononova, Rustem I Litvinov, Artem Zhmurov, et al.
Journal of Computer-Aided Molecular Design|November 14, 2018
Monte Carlo on the manifold and MD refinement for binding pose prediction of protein-ligand complexes: 2017 D3R Grand ChallengeMikhail Ignatov, Cong Liu, Andrey Alekseenko, et al.
Journal of Medicinal Chemistry|July 6, 2019
Kinase Atlas: Druggability Analysis of Potential Allosteric Sites in KinasesChristine Yueh, Justin Rettenmaier, Bing Xia, et al.
Proteins|August 25, 2019
Template-based modeling by ClusPro in CASP13 and the potential for using co-evolutionary information in dockingKathryn A Porter, Dzmitry Padhorny, Israel Desta, et al.
Pageof 2

Showing results (1-10 of 14) with videos related to

Sort By:
Pageof 2
Frontiers in Molecular Biosciences|November 19, 2019
Improved Modeling of Peptide-Protein Binding Through Global Docking and Accelerated Molecular Dynamics SimulationsJinan Wang, Andrey Alekseenko, Dima Kozakov, et al.
Methods in Molecular Biology (Clifton, N.J.)|July 5, 2020
Protein-Protein and Protein-Peptide Docking with ClusPro ServerAndrey Alekseenko, Mikhail Ignatov, George Jones, et al.
Journal of Computational Chemistry|March 27, 2016
SOP-GPU: influence of solvent-induced hydrodynamic interactions on dynamic structural transitions in protein assembliesAndrey Alekseenko, Olga Kononova, Yaroslav Kholodov, et al.
Journal of Molecular Biology|December 22, 2019
ClusPro LigTBM: Automated Template-based Small Molecule DockingAndrey Alekseenko, Sergei Kotelnikov, Mikhail Ignatov, et al.
Journal of Computer-Aided Molecular Design|November 5, 2017
Protein-ligand docking using FFT based sampling: D3R case studyDzmitry Padhorny, David R Hall, Hanieh Mirzaei, et al.
Journal of Computer-Aided Molecular Design|December 28, 2019
Sampling and refinement protocols for template-based macrocycle docking: 2018 D3R Grand Challenge 4Sergei Kotelnikov, Andrey Alekseenko, Cong Liu, et al.
The Journal of Biological Chemistry|May 31, 2013
Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrinOlga Kononova, Rustem I Litvinov, Artem Zhmurov, et al.
Journal of Computer-Aided Molecular Design|November 14, 2018
Monte Carlo on the manifold and MD refinement for binding pose prediction of protein-ligand complexes: 2017 D3R Grand ChallengeMikhail Ignatov, Cong Liu, Andrey Alekseenko, et al.
Journal of Medicinal Chemistry|July 6, 2019
Kinase Atlas: Druggability Analysis of Potential Allosteric Sites in KinasesChristine Yueh, Justin Rettenmaier, Bing Xia, et al.
Proteins|August 25, 2019
Template-based modeling by ClusPro in CASP13 and the potential for using co-evolutionary information in dockingKathryn A Porter, Dzmitry Padhorny, Israel Desta, et al.
Pageof 2