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Trends in Plant Science|October 18, 2011
A quantitative comparison of Calvin-Benson cycle modelsAnne Arnold, Zoran NikoloskiPlant Physiology|May 9, 2014
Bottom-up Metabolic Reconstruction of Arabidopsis and Its Application to Determining the Metabolic Costs of Enzyme ProductionAnne Arnold, Zoran NikoloskiPlos One|February 24, 2015
Effects of varying nitrogen sources on amino acid synthesis costs in Arabidopsis thaliana under different light and carbon-source conditionsAnne Arnold, Max Sajitz-Hermstein, Zoran NikoloskiBio Systems|November 16, 2010
Spatiotemporal dynamics of the Calvin cycle: multistationarity and symmetry breaking instabilitiesSergio Grimbs, Anne Arnold, Aneta Koseska, et al.Bioinformatics (Oxford, England)|August 2, 2011
JMassBalance: mass-balanced randomization and analysis of metabolic networksGeorg Basler, Zoran NikoloskiBioinformatics (Oxford, England)|July 28, 2014
img2net: automated network-based analysis of imaged phenotypesDavid Breuer, Zoran NikoloskiMethods in Molecular Biology (Clifton, N.J.)|August 20, 2017
Genome-Scale Modeling of Photorespiratory Pathway ManipulationAnika Küken, Zoran NikoloskiScientific Reports|December 16, 2015
DeFiNe: an optimisation-based method for robust disentangling of filamentous networksDavid Breuer, Zoran NikoloskiPlant Physiology|February 1, 2023
Toward mechanistic modeling and rational engineering of plant respirationPhilipp Wendering, Zoran NikoloskiPlos Computational Biology|March 23, 2022
COMMIT: Consideration of metabolite leakage and community composition improves microbial community reconstructionsPhilipp Wendering, Zoran NikoloskiPageof 26