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Bioinformatics (Oxford, England)|June 30, 2023
Deep Local Analysis deconstructs protein-protein interfaces and accurately estimates binding affinity changes upon mutationYasser Mohseni Behbahani, Elodie Laine, Alessandra CarboneBMC Bioinformatics|March 25, 2011
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional modelsJuliana S Bernardes, Alessandra Carbone, Gerson ZaveruchaBMC Genomics|June 27, 2021
UniBind: maps of high-confidence direct TF-DNA interactions across nine speciesRafael Riudavets Puig, Paul Boddie, Aziz Khan, et al.Nucleic Acids Research|December 6, 2018
A map of direct TF-DNA interactions in the human genomeMarius Gheorghe, Geir Kjetil Sandve, Aziz Khan, et al.Bioinformatics (Oxford, England)|October 22, 2024
Improving bioinformatics software quality through teamworkKatalin Ferenc, Ieva Rauluseviciute, Ladislav Hovan, et al.Trends in Molecular Medicine|May 21, 2024
Copy number alterations: a catastrophic orchestration of the breast cancer genomeParastoo Shahrouzi, Farzaneh Forouz, Anthony Mathelier, et al.Briefings in Bioinformatics|July 7, 2025
Gene regulatory network integration with multi-omics data enhances survival predictions in cancerRomana T Pop, Ping-Han Hsieh, Tatiana Belova, et al.Nucleic Acids Research|May 23, 2021
MyCLADE: a multi-source domain annotation server for sequence functional explorationRiccardo Vicedomini, Clémence Blachon, Francesco Oteri, et al.Bioinformatics (Oxford, England)|April 25, 2020
Targeted domain assembly for fast functional profiling of metagenomic datasets with S3ALaurent David, Riccardo Vicedomini, Hugues Richard, et al.Nucleic Acids Research|December 1, 2016
JET2 Viewer: a database of predicted multiple, possibly overlapping, protein-protein interaction sites for PDB structuresHugues Ripoche, Elodie Laine, Nicoletta Ceres, et al.Pageof 15