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Nucleic Acids Research|May 26, 2009
HotSpot Wizard: a web server for identification of hot spots in protein engineeringAntonin Pavelka, Eva Chovancova, Jiri Damborsky
Biotechnology Advances|February 22, 2012
Software tools for identification, visualization and analysis of protein tunnels and channelsJan Brezovsky, Eva Chovancova, Artur Gora, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|June 14, 2016
CAVER: Algorithms for Analyzing Dynamics of Tunnels in MacromoleculesAntonin Pavelka, Eva Sebestova, Barbora Kozlikova, et al.
Biotechnology Journal|September 12, 2012
Haloalkane dehalogenases: biotechnological applicationsTana Koudelakova, Sarka Bidmanova, Pavel Dvorak, et al.
Plos Computational Biology|January 24, 2014
PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutationsJaroslav Bendl, Jan Stourac, Ondrej Salanda, et al.
Chembiochem : a European Journal of Chemical Biology|April 9, 2013
Expansion of access tunnels and active-site cavities influence activity of haloalkane dehalogenases in organic cosolventsVeronika Stepankova, Morteza Khabiri, Jan Brezovsky, et al.
Plos Computational Biology|October 25, 2012
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structuresEva Chovancova, Antonin Pavelka, Petr Benes, et al.
Bioinformatics (Oxford, England)|May 10, 2018
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectoriesAdam Jurcik, David Bednar, Jan Byska, et al.
Bioinformatics (Oxford, England)|May 31, 2014
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structuresBarbora Kozlikova, Eva Sebestova, Vilem Sustr, et al.
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