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NAR Genomics and Bioinformatics|July 26, 2021
miRge3.0: a comprehensive microRNA and tRF sequencing analysis pipelineArun H Patil, Marc K Halushka
NAR Genomics and Bioinformatics|January 12, 2024
Brooklyn plots to identify co-expression dysregulation in single cell sequencingArun H Patil, Matthew N McCall, Marc K Halushka
3 Biotech|May 14, 2017
Identification and characterization of a grain micronutrient-related OsFRO2 rice gene ortholog from micronutrient-rich little millet (Panicum sumatrense)Girish Chandel, Mahima Dubey, Saurabh Gupta, et al.
Journal of Clinical Bioinformatics|November 28, 2012
Genome-wide Profiling of RNA splicing in prostate tumor from RNA-seq data using virtual microarraysSubhashini Srinivasan, Arun H Patil, Mohit Verma, et al.
Gigascience|August 25, 2022
A curated human cellular microRNAome based on 196 primary cell typesArun H Patil, Andrea Baran, Zachary P Brehm, et al.
Biorxiv : the Preprint Server for Biology|July 29, 2024
miRglmm: a generalized linear mixed model of isomiR-level counts improves estimation of miRNA-level differential expression and uncovers variable differential expression between isomiRsAndrea M Baran, Arun H Patil, Ernesto Aparicio-Puerta, et al.
Omics : a Journal of Integrative Biology|December 4, 2020
Plant Omics: Metabolomics and Network Pharmacology of Liquorice, Indian Ayurvedic Medicine YashtimadhuGayathree Karthikkeyan, Ravishankar Pervaje, Yashwanth Subbannayya, et al.
Genome Biology|April 23, 2025
miRglmm: a generalized linear mixed model of isomiR-level counts improves estimation of miRNA-level differential expression and uncovers variable differential expression between isomiRsAndrea M Baran, Arun H Patil, Ernesto Aparicio-Puerta, et al.
Omics : a Journal of Integrative Biology|June 22, 2019
Dissecting Alzheimer's Disease Molecular Substrates by Proteomics and Discovery of Novel Post-translational ModificationsSayali Chandrashekhar Deolankar, Arun H Patil, Shashanka G Koyangana, et al.
Omics : a Journal of Integrative Biology|July 13, 2021
Mapping Post-Translational Modifications in Brain Regions in Alzheimer's Disease Using Proteomics Data MiningSayali Chandrashekhar Deolankar, Arun H Patil, Devasahayam Arokia Balaya Rex, et al.
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