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Communicative & Integrative Biology|June 11, 2013
At the origin of spliceosomal introns: Is multiplication of introner-like elements the main mechanism of intron gain in fungi?Jérôme Collemare, Ate van der Burgt, Pierre J G M de Wit
Current Biology : CB|June 5, 2012
Birth of new spliceosomal introns in fungi by multiplication of introner-like elementsAte van der Burgt, Edouard Severing, Pierre J G M de Wit, et al.
BMC Bioinformatics|January 18, 2014
Automated alignment-based curation of gene models in filamentous fungiAte van der Burgt, Edouard Severing, Jérôme Collemare, et al.
Molecular Plant Pathology|January 8, 2014
Pseudogenization in pathogenic fungi with different host plants and lifestyles might reflect their evolutionary pastAte van der Burgt, Mansoor Karimi Jashni, Ali H Bahkali, et al.
Plos One|June 6, 2015
Novel Introner-Like Elements in fungi Are Involved in Parallel Gains of Spliceosomal IntronsJérôme Collemare, Henriek G Beenen, Pedro W Crous, et al.
BMC Genomics|May 2, 2009
In silico miRNA prediction in metazoan genomes: balancing between sensitivity and specificityAte van der Burgt, Mark W J E Fiers, Jan-Peter Nap, et al.
Molecular Microbiology|February 14, 2014
Functional analysis of the conserved transcriptional regulator CfWor1 in Cladosporium fulvum reveals diverse roles in the virulence of plant pathogenic fungiBilal Okmen, Jérôme Collemare, Scott Griffiths, et al.
Frontiers in Plant Science|August 26, 2021
Understanding the Effectiveness of Genomic Prediction in Tetraploid PotatoStefan Wilson, Chaozhi Zheng, Chris Maliepaard, et al.
BMC Bioinformatics|February 14, 2008
High-throughput bioinformatics with the Cyrille2 pipeline systemMark W E J Fiers, Ate van der Burgt, Erwin Datema, et al.
In Silico Biology|May 10, 2008
The use of multiple hierarchically independent gene ontology terms in gene function prediction and genome annotationYiannis A I Kourmpetis, Ate van der Burgt, Marco C A M Bink, et al.
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