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Npj Antimicrobials and Resistance|March 14, 2025
How AI can help us beat AMRAutumn Arnold, Stewart McLellan, Jonathan M StokesMolecular Systems Biology|April 23, 2026
SyntheMol-RL: a flexible reinforcement learning framework for designing easily synthesizable antibioticsKyle Swanson, Gary Liu, Denise B Catacutan, et al.Expert Opinion on Drug Discovery|August 31, 2023
Applications of machine learning in microbial natural product drug discoveryAutumn Arnold, Jeremie Alexander, Gary Liu, et al.Nature Chemical Biology|July 19, 2024
Machine learning in preclinical drug discoveryDenise B Catacutan, Jeremie Alexander, Autumn Arnold, et al.Nature Microbiology|October 3, 2025
Discovery and artificial intelligence-guided mechanistic elucidation of a narrow-spectrum antibioticDenise B Catacutan, Vian Tran, Autumn Arnold, et al.Current Opinion in Microbiology|August 13, 2022
A brief guide to machine learning for antibiotic discoveryGary Liu, Jonathan M StokesAnnals of the New York Academy of Sciences|November 30, 2022
Antibiotic discovery in the artificial intelligence eraTelmah Lluka, Jonathan M StokesNature Chemical Biology|November 18, 2015
Chemical modulators of ribosome biogenesis as biological probesJonathan M Stokes, Eric D BrownAntibiotics (Basel, Switzerland)|April 13, 2018
Our Evolving Understanding of the Mechanism of QuinolonesArnaud Gutierrez, Jonathan M Stokes, Ivan MaticCell Chemical Biology|September 11, 2020
Eradicating Bacterial Persisters with Combinations of Strongly and Weakly Metabolism-Dependent AntibioticsErica J Zheng, Jonathan M Stokes, James J CollinsPageof 4