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Nature Computational Science
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January 4, 2024
From noise to protein with image models
Ava P Amini, Kevin K Yang
Cell
|
August 22, 2025
Simplifying protein engineering with deep learning
Kevin K Yang, Ava P Amini
Plos Computational Biology
|
January 8, 2025
Benchmarking uncertainty quantification for protein engineering
Kevin P Greenman, Ava P Amini, Kevin K Yang
Plos Computational Biology
|
February 9, 2026
Trainable subnetworks reveal insights into structure knowledge organization in protein language models
Ria Vinod, Ava P Amini, Lorin Crawford, et al.
Genome Biology
|
April 18, 2025
Zero-shot evaluation reveals limitations of single-cell foundation models
Kasia Z Kedzierska, Lorin Crawford, Ava P Amini, et al.
Current Opinion in Structural Biology
|
April 20, 2026
Closing the loop: Experimentally validated methods in artificial intelligence-driven protein design
Clayton W Kosonocky, Sarah Alamdari, Kevin K Yang, et al.
Bioinformatics (Oxford, England)
|
April 15, 2025
ProtNote: a multimodal method for protein-function annotation
Samir Char, Nathaniel Corley, Sarah Alamdari, et al.
Current Opinion in Structural Biology
|
February 21, 2025
Toward deep learning sequence-structure co-generation for protein design
Chentong Wang, Sarah Alamdari, Carles Domingo-Enrich, et al.
Plos Computational Biology
|
May 23, 2023
Deep self-supervised learning for biosynthetic gene cluster detection and product classification
Carolina Rios-Martinez, Nicholas Bhattacharya, Ava P Amini, et al.
Nature Computational Science
|
January 30, 2026
Improving atlas-scale single-cell annotation models with hierarchical cross-entropy loss
Sebastiano Cultrera di Montesano, Davide D'Ascenzo, Srivatsan Raghavan, et al.
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of 3
Search research articles
Search
Showing results (1-10 of 26) with videos related to
Sort By:
Page
of 3
Nature Computational Science
|
January 4, 2024
From noise to protein with image models
Ava P Amini, Kevin K Yang
Cell
|
August 22, 2025
Simplifying protein engineering with deep learning
Kevin K Yang, Ava P Amini
Plos Computational Biology
|
January 8, 2025
Benchmarking uncertainty quantification for protein engineering
Kevin P Greenman, Ava P Amini, Kevin K Yang
Plos Computational Biology
|
February 9, 2026
Trainable subnetworks reveal insights into structure knowledge organization in protein language models
Ria Vinod, Ava P Amini, Lorin Crawford, et al.
Genome Biology
|
April 18, 2025
Zero-shot evaluation reveals limitations of single-cell foundation models
Kasia Z Kedzierska, Lorin Crawford, Ava P Amini, et al.
Current Opinion in Structural Biology
|
April 20, 2026
Closing the loop: Experimentally validated methods in artificial intelligence-driven protein design
Clayton W Kosonocky, Sarah Alamdari, Kevin K Yang, et al.
Bioinformatics (Oxford, England)
|
April 15, 2025
ProtNote: a multimodal method for protein-function annotation
Samir Char, Nathaniel Corley, Sarah Alamdari, et al.
Current Opinion in Structural Biology
|
February 21, 2025
Toward deep learning sequence-structure co-generation for protein design
Chentong Wang, Sarah Alamdari, Carles Domingo-Enrich, et al.
Plos Computational Biology
|
May 23, 2023
Deep self-supervised learning for biosynthetic gene cluster detection and product classification
Carolina Rios-Martinez, Nicholas Bhattacharya, Ava P Amini, et al.
Nature Computational Science
|
January 30, 2026
Improving atlas-scale single-cell annotation models with hierarchical cross-entropy loss
Sebastiano Cultrera di Montesano, Davide D'Ascenzo, Srivatsan Raghavan, et al.
Page
of 3