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Journal of Biosciences
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October 12, 2022
Deciphering the regulatory syntax of genomic DNA with deep learning
Avantika Lal
Genome Research
|
September 25, 2024
Designing realistic regulatory DNA with autoregressive language models
Avantika Lal, David Garfield, Tommaso Biancalani, et al.
G3 (Bethesda, Md.)
|
April 25, 2018
Regulation of Global Transcription in <i>Escherichia coli</i> by Rsd and 6S RNA
Avantika Lal, Sandeep Krishna, Aswin Sai Narain Seshasayee
Viruses
|
July 27, 2022
Investigating the Human Host-ssRNA Virus Interaction Landscape Using the SMEAGOL Toolbox
Avantika Lal, Mariana Galvao Ferrarini, Andreas J Gruber
Plos Computational Biology
|
June 28, 2021
De novo mutational signature discovery in tumor genomes using SparseSignatures
Avantika Lal, Keli Liu, Robert Tibshirani, et al.
Genome Biology
|
May 6, 2025
Polygraph: a software framework for the systematic assessment of synthetic regulatory DNA elements
Avantika Lal, Laura Gunsalus, Anay Gupta, et al.
Nature Communications
|
October 28, 2018
Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival
Daniele Ramazzotti, Avantika Lal, Bo Wang, et al.
Nature Methods
|
October 15, 2025
gReLU: a comprehensive framework for DNA sequence modeling and design
Avantika Lal, Laura Gunsalus, Surag Nair, et al.
BMC Medical Genomics
|
June 12, 2019
Comprehensive genomic characterization of breast tumors with BRCA1 and BRCA2 mutations
Avantika Lal, Daniele Ramazzotti, Ziming Weng, et al.
Nature Communications
|
March 31, 2016
Genome scale patterns of supercoiling in a bacterial chromosome
Avantika Lal, Amlanjyoti Dhar, Andrei Trostel, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 16) with videos related to
Sort By:
Page
of 2
Journal of Biosciences
|
October 12, 2022
Deciphering the regulatory syntax of genomic DNA with deep learning
Avantika Lal
Genome Research
|
September 25, 2024
Designing realistic regulatory DNA with autoregressive language models
Avantika Lal, David Garfield, Tommaso Biancalani, et al.
G3 (Bethesda, Md.)
|
April 25, 2018
Regulation of Global Transcription in <i>Escherichia coli</i> by Rsd and 6S RNA
Avantika Lal, Sandeep Krishna, Aswin Sai Narain Seshasayee
Viruses
|
July 27, 2022
Investigating the Human Host-ssRNA Virus Interaction Landscape Using the SMEAGOL Toolbox
Avantika Lal, Mariana Galvao Ferrarini, Andreas J Gruber
Plos Computational Biology
|
June 28, 2021
De novo mutational signature discovery in tumor genomes using SparseSignatures
Avantika Lal, Keli Liu, Robert Tibshirani, et al.
Genome Biology
|
May 6, 2025
Polygraph: a software framework for the systematic assessment of synthetic regulatory DNA elements
Avantika Lal, Laura Gunsalus, Anay Gupta, et al.
Nature Communications
|
October 28, 2018
Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival
Daniele Ramazzotti, Avantika Lal, Bo Wang, et al.
Nature Methods
|
October 15, 2025
gReLU: a comprehensive framework for DNA sequence modeling and design
Avantika Lal, Laura Gunsalus, Surag Nair, et al.
BMC Medical Genomics
|
June 12, 2019
Comprehensive genomic characterization of breast tumors with BRCA1 and BRCA2 mutations
Avantika Lal, Daniele Ramazzotti, Ziming Weng, et al.
Nature Communications
|
March 31, 2016
Genome scale patterns of supercoiling in a bacterial chromosome
Avantika Lal, Amlanjyoti Dhar, Andrei Trostel, et al.
Page
of 2