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Microbial Genomics
|
November 11, 2021
A comparative study of pan-genome methods for microbial organisms: <i>Acinetobacter baumannii</i> pan-genome reveals structural variation in antimicrobial resistance-carrying plasmids
Aysun Urhan, Thomas Abeel
Scientific Reports
|
March 24, 2021
Emergence of novel SARS-CoV-2 variants in the Netherlands
Aysun Urhan, Thomas Abeel
Bioinformatics (Oxford, England)
|
October 5, 2023
SHIP: identifying antimicrobial resistance gene transfer between plasmids
Marco Teixeira, Stephanie Pillay, Aysun Urhan, et al.
Frontiers in Microbiology
|
December 19, 2022
Metagenomic-based surveillance systems for antibiotic resistance in non-clinical settings
Stephanie Pillay, David Calderón-Franco, Aysun Urhan, et al.
Biorxiv : the Preprint Server for Biology
|
May 19, 2023
SAP: Synteny-aware gene function prediction for bacteria using protein embeddings
Aysun Urhan, Bianca-Maria Cosma, Ashlee M Earl, et al.
Bioinformatics (Oxford, England)
|
May 22, 2024
SAFPred: synteny-aware gene function prediction for bacteria using protein embeddings
Aysun Urhan, Bianca-Maria Cosma, Ashlee M Earl, et al.
Bioinformatics (Oxford, England)
|
October 29, 2022
HAT: haplotype assembly tool using short and error-prone long reads
Ramin Shirali Hossein Zade, Aysun Urhan, Alvaro Assis de Souza, et al.
Biorxiv : the Preprint Server for Biology
|
June 9, 2023
Global diversity of enterococci and description of 18 novel species
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, et al.
Proceedings of the National Academy of Sciences of the United States of America
|
February 28, 2024
Global diversity of enterococci and description of 18 previously unknown species
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, et al.
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Search research articles
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Showing results (1-10 of 9) with videos related to
Sort By:
Page
of 1
Microbial Genomics
|
November 11, 2021
A comparative study of pan-genome methods for microbial organisms: <i>Acinetobacter baumannii</i> pan-genome reveals structural variation in antimicrobial resistance-carrying plasmids
Aysun Urhan, Thomas Abeel
Scientific Reports
|
March 24, 2021
Emergence of novel SARS-CoV-2 variants in the Netherlands
Aysun Urhan, Thomas Abeel
Bioinformatics (Oxford, England)
|
October 5, 2023
SHIP: identifying antimicrobial resistance gene transfer between plasmids
Marco Teixeira, Stephanie Pillay, Aysun Urhan, et al.
Frontiers in Microbiology
|
December 19, 2022
Metagenomic-based surveillance systems for antibiotic resistance in non-clinical settings
Stephanie Pillay, David Calderón-Franco, Aysun Urhan, et al.
Biorxiv : the Preprint Server for Biology
|
May 19, 2023
SAP: Synteny-aware gene function prediction for bacteria using protein embeddings
Aysun Urhan, Bianca-Maria Cosma, Ashlee M Earl, et al.
Bioinformatics (Oxford, England)
|
May 22, 2024
SAFPred: synteny-aware gene function prediction for bacteria using protein embeddings
Aysun Urhan, Bianca-Maria Cosma, Ashlee M Earl, et al.
Bioinformatics (Oxford, England)
|
October 29, 2022
HAT: haplotype assembly tool using short and error-prone long reads
Ramin Shirali Hossein Zade, Aysun Urhan, Alvaro Assis de Souza, et al.
Biorxiv : the Preprint Server for Biology
|
June 9, 2023
Global diversity of enterococci and description of 18 novel species
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, et al.
Proceedings of the National Academy of Sciences of the United States of America
|
February 28, 2024
Global diversity of enterococci and description of 18 previously unknown species
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, et al.
Page
of 1