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Biorxiv : the Preprint Server for Biology|December 4, 2023
PVTAD: ALZHEIMER'S DISEASE DIAGNOSIS USING PYRAMID VISION TRANSFORMER APPLIED TO WHITE MATTER OF T1-WEIGHTED STRUCTURAL MRI DATAMaryam Akhavan Aghdam, Serdar Bozdag, Fahad Saeed, et al.Proceedings. IEEE International Symposium on Biomedical Imaging|March 5, 2025
PVTAD: ALZHEIMER'S DISEASE DIAGNOSIS USING PYRAMID VISION TRANSFORMER APPLIED TO WHITE MATTER OF T1-WEIGHTED STRUCTURAL MRI DATAMaryam Akhavan Aghdam, Serdar Bozdag, Fahad Saeed, et al.BMC Bioinformatics|March 8, 2019
GSEPD: a Bioconductor package for RNA-seq gene set enrichment and projection displayKarl Stamm, Aoy Tomita-Mitchell, Serdar BozdagBrain Informatics|March 21, 2025
Machine-learning models for Alzheimer's disease diagnosis using neuroimaging data: survey, reproducibility, and generalizability evaluationMaryam Akhavan Aghdam, Serdar Bozdag, Fahad Saeed, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|August 10, 2013
A graph-theoretical approach to the selection of the minimum tiling path from a physical mapSerdar Bozdag, Timothy J Close, Stefano LonardiBiorxiv : the Preprint Server for Biology|February 13, 2026
DyGraphTrans: A temporal graph representation learning framework for modeling disease progression from Electronic Health RecordsMost Tahmina Rahman, Mohammad Al Olaimat, Serdar Bozdag, et al.Research Square|September 26, 2025
HINN: Hierarchical Input Neural Network identifies multi-omics biomarker for cognitive declineYashu Vashishath, Sarah Beaver, Fahad Saeed, et al.Biorxiv : the Preprint Server for Biology|February 9, 2026
scAURA: Alignment- and Uniformity-based Graph Debiased Contrastive Representation Architecture for Self-Supervised Clustering of Single-Cell TranscriptomicsJubair Ibn Malik Rifat, Sarthak Engala, Serdar BozdagBiorxiv : the Preprint Server for Biology|November 19, 2025
A Systematic Fairness Evaluation of Racial Bias in Alzheimer's Disease Diagnosis Using Machine Learning ModelsNeha Goud Baddam, Bizhan Alipour Pijani, Serdar BozdagCancer Informatics|November 5, 2014
Master regulators, regulatory networks, and pathways of glioblastoma subtypesSerdar Bozdag, Aiguo Li, Mehmet Baysan, et al.Pageof 7