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Nature Communications|May 22, 2026
N-Orbit: towards a universal model and metric for comparing tissue microenvironmentsBarbara Xiong, Yuxuan Hu, Kai TanScience Advances|April 15, 2021
CytoTalk: De novo construction of signal transduction networks using single-cell transcriptomic dataYuxuan Hu, Tao Peng, Lin Gao, et al.Nature Cancer|January 16, 2026
Cellular neighborhoods in cancerLichun Ma, Barbara Xiong, Meng Liu, et al.Nature Methods|January 9, 2024
Unsupervised and supervised discovery of tissue cellular neighborhoods from cell phenotypesYuxuan Hu, Jiazhen Rong, Yafei Xu, et al.Nature Communications|May 18, 2019
Optimal control nodes in disease-perturbed networks as targets for combination therapyYuxuan Hu, Chia-Hui Chen, Yang-Yang Ding, et al.Molecular Cancer Therapeutics|December 25, 2019
Mechanisms of Entrectinib Resistance in a Neuroblastoma Xenograft ModelSuzanne P MacFarland, Koumudi Naraparaju, Radhika Iyer, et al.Communications Biology|November 19, 2025
Inference of cell-type composition and single-cell spatial maps from spatial transcriptomics data with SWOTLanying Wang, Yuxuan Hu, Lin GaoFrontiers in Genetics|April 8, 2020
LAceModule: Identification of Competing Endogenous RNA Modules by Integrating Dynamic CorrelationXiao Wen, Lin Gao, Yuxuan HuAngewandte Chemie (International Ed. in English)|September 24, 2022
Activatable Multimodal Probes for In Vivo Imaging and TheranosticsYuqi Wang, Yuxuan Hu, Deju YeAdvanced Materials (Deerfield Beach, Fla.)|March 27, 2026
Serum-Inert Tandem-Locked Fluorescent Probe for Specific Imaging of Intratumoral Complement SystemYuxuan Hu, Jiayan Wu, Kanyi PuPageof 63